Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00537 ATGTCTTCCTCTGAAAATCTATGGAACGTTGATTGGGATGCTGATCTCGATGGTACGAAATTCTCCAAGTACACCACTCGTCACTGGGATGATGATCATGAATATAATTCTAACATATTCAGAAATCACGACGTGTTCTTGAGTTTCAGAGGCGAAGACACTCGCGCATCATTCACTTCGCATCTCTCCGCGTCTCTTCAAAACGCCGGAATTAACGTTTTCAAGGACGATCAATCACTTCAAAGAGGAGATCACATCTCATCCGCACTACTTCGAGGGATTTACGGTTCTAGAATTTCTGTTATTGTGTTCTCCAGAAACTACGCTGGTTCGCGATGGTGTCTTCAAGAGTTGGTTAGAATAATGGAGTGTAAGAGAAATGTTGATCACGTGGTACTGCCTGTGTTCTACGGTGTTGATCCGTCGGAAGTTCGTCGTCAAACCGGTGAGTTTGGAAAAGCTTTTGGAAAGAGTGCTTTTGAATTGGACGAATACATGAAGCAAAGTTGGAGAAATGCGCTTCGTGAGGCTGGTGGCATTGCAGGATTTGATGTCCAAAATTACAGGAATGAAAATGAGGTTATCAAGGAGATTGTTAAAAAGGTTATACACATACTTGACATATCAGACTTGTTCGTTGTTGATAATCCGGTTGGAGTTGAATCTCGAGTGCAAGATATGATCCAACTTTTAGAAACTCAACAATCAAATGACGTTAAACTACTAGGGATATGGGGGATGGGTGGAATCGGTAAAACCACCATTGCAAAAGCTATTTACAATAAAATTGGCCGCGATTTTGAAGGTAGGAGCTTTCTTGCAAATATTAGGGAGGTTTGGGAGCAAGTTCGTGGACAAATATCTTTACAGGAACAACTTATGCACGATATTTTCAAAAAAACAACGAAGATACAAAACATTGGATCAGGACAATCTATACTAAAGAGAAGATTATGTGGAAAAAGAGTATTACTTGTACTTGATGATGTGAATGAACTAGACCAAGTATATGCTTTGTGTGGAAGTTGTAAATGGTTTGCTCCAGGGAGTAGAATAATCATCACAACCAGAGATAAACATATACTTAGAGGGGATAGAGTTAACAAAATATCCACAATGAAAGAAATGGATGAAAGTGAATCTCTTGAGCTTTTTAGTTGGCATGCATTCAAGCAAACGAGTCCCAAAGAAGATTTTTATGAAATTTCCAAATATGTAGTTAAGTATTCTGGGGGGTTGCCGCTAGCTCTGGAAGTCCTTGGGTCTTATTTGTTTGATAGAGAAGTATCTGAGTGGATTTGGGTATTGGAGAAACTCAAAAGAATTCCCAATGATCAAGTACATAAAAAGTTAAAAATAAGCTACGATGGTTTAAATGATCATACAGAGAAAGAAATATTCCTTGACATCGCCTGCTTCTTTATTGGGATGGATCGAAATGATGTTATACATATATTAAACGGTTGTGAATTTTTCGCAGAAATTGGAGTACGCATTCTTGTCGAGCGAAGCCTTGTAACTGTTGATGATAAGAACAAACTTCGCATGCATGATTTACTGCGGGATATGGCAAGAGAAATCATTCGTAAGAAATCACCAAAGAGGCCTGAGAAGCGTAGTAGGTTGTGGTTTCATGAGGATGTGCTTTATGTTTTGTCAAAACATAATGGAAGAAAAGTTGTTGAGGGACTGGCTTTGAAGCTGCCAGGTCATAGTACAAAATGTTTTAGTACCAAAGCATTTAAAGACATGGAAGAACTCAGATTGCTTCAACTTTCTGGTGCACAACTTGATGGAGATTTTAAATATCTTTCAAGAAATTTGAGATGGTTGCACTGGAATGGATTTCCTTTATCATGCATACCTTCAAATTTCTACCAAAGAAATTTAGTTTCCATTGAGTTAGAAAACAGCAATATCAAACTTGTGTGGAAAGAGATGCAGAGGATGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCACATTATCTGACTCAGACCCCCGACTTTTCAAACTTACCTAATCTTGAAAAACTAATACTCAAAGATTGTCCAAGGTTGTCTGAGGTTTCCCATAGCATTGGACATCTCAAGAAAGTTCTTCTGATAAATTTGAAAGACTGTATTCGTCTTTGTAACCTTCCAAGAAACATCTATACGTTGAAATCTCTGAAAACTCTCATTCTATCTGGATGTTTAAAGATTAACAAGTTGGAAGAGGACTTGGAACAAATGGAATCTCTAACCGCTCTGATTGCAGATAACACTACTATAACAAAAGTGCCCTTTTCCGTTGTAAGGTCAAAAAACATTGGATATATTTCTTTGTGTGGATACAAAGGATTCTCCCGCGACGTGTTTCCTTCTATCATTTGGTCTTGGATGTCACCGACAAATAACCTCTCACCCAATGTCATGTCGTCCCTTGTTTCAATAAATGCATCAAATAGTATTTCCCACAATCTATCATCTATTTCCAGAGTCCTTCCTAAGCTTCAAAGTCTTTGGCTGGAGTGTGAATCGGATCTTCAACTATCACAAGATGCAGCAATAATTTTGAATGCTTTAAGTGCAACAAGTTCTAAGGAATTGGAATCAACTGCAACTACATCACAAGTACTAGATGTAAAGACTTTTTCATTAATTGAATGTCGCAGTCAAGTGCAAGTTTCAACAACAAAAACTTCCATGAAATCTCTTTTAATTCAAATGGGAATGAGTTGCATAATCACCAATCTTCTAAAAGAGAAGATCTTACAGAATTTGTCTGTCGAAGGGTGTGGTAGTTTTTTGCTCCCCGGTGATAACTACCCAGATTGGTTAACTTTCAATTCCGAAGGTTCTTCGGTAACTTTTGAAGTCCCTCAAGTGGAAGACAATAATTTGAAGTCAGTGATGTGCGTTGTCCATTCTTCAAGCCCAGACAATGTTACATCATATGGCCTTAAAAATGTGTTGGTAATAAATTACACAAAGACCACCATTCAACTCTATAAGACAGAGGCGTTATCGTCCTTTGAAAACGAGGAGTGGCAGAGACTAGTATCAACTATGGAAGCTGGTGACAAAGTGGAGATTGCTGTTGTTTTTGAGAAGAATTTCTTTGTGATGAAGACTGCAGTTTATCTCATATATGATGAACTAATAGGCCAAAAATTGGAGCGATGTCATGCACTAGATAAGAATGTTCTTGTTAGTAGTGGTGATGAAAATGAATGCACTGCCAAGAGGATTTCTCCTCAAGTAGAGTCCGCAGATGATTTTAAACAAGAACAGAAAAGAAGAAAACTTGAATGA 3297 0.3794 MSSSENLWNVDWDADLDGTKFSKYTTRHWDDDHEYNSNIFRNHDVFLSFRGEDTRASFTSHLSASLQNAGINVFKDDQSLQRGDHISSALLRGIYGSRISVIVFSRNYAGSRWCLQELVRIMECKRNVDHVVLPVFYGVDPSEVRRQTGEFGKAFGKSAFELDEYMKQSWRNALREAGGIAGFDVQNYRNENEVIKEIVKKVIHILDISDLFVVDNPVGVESRVQDMIQLLETQQSNDVKLLGIWGMGGIGKTTIAKAIYNKIGRDFEGRSFLANIREVWEQVRGQISLQEQLMHDIFKKTTKIQNIGSGQSILKRRLCGKRVLLVLDDVNELDQVYALCGSCKWFAPGSRIIITTRDKHILRGDRVNKISTMKEMDESESLELFSWHAFKQTSPKEDFYEISKYVVKYSGGLPLALEVLGSYLFDREVSEWIWVLEKLKRIPNDQVHKKLKISYDGLNDHTEKEIFLDIACFFIGMDRNDVIHILNGCEFFAEIGVRILVERSLVTVDDKNKLRMHDLLRDMAREIIRKKSPKRPEKRSRLWFHEDVLYVLSKHNGRKVVEGLALKLPGHSTKCFSTKAFKDMEELRLLQLSGAQLDGDFKYLSRNLRWLHWNGFPLSCIPSNFYQRNLVSIELENSNIKLVWKEMQRMEKLKILNLSHSHYLTQTPDFSNLPNLEKLILKDCPRLSEVSHSIGHLKKVLLINLKDCIRLCNLPRNIYTLKSLKTLILSGCLKINKLEEDLEQMESLTALIADNTTITKVPFSVVRSKNIGYISLCGYKGFSRDVFPSIIWSWMSPTNNLSPNVMSSLVSINASNSISHNLSSISRVLPKLQSLWLECESDLQLSQDAAIILNALSATSSKELESTATTSQVLDVKTFSLIECRSQVQVSTTKTSMKSLLIQMGMSCIITNLLKEKILQNLSVEGCGSFLLPGDNYPDWLTFNSEGSSVTFEVPQVEDNNLKSVMCVVHSSSPDNVTSYGLKNVLVINYTKTTIQLYKTEALSSFENEEWQRLVSTMEAGDKVEIAVVFEKNFFVMKTAVYLIYDELIGQKLERCHALDKNVLVSSGDENECTAKRISPQVESADDFKQEQKRRKLE 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00537 1098 PRINTS Disease resistance protein signature 410 424 - -
Vivi5g00537 1098 PRINTS Disease resistance protein signature 241 256 - -
Vivi5g00537 1098 PRINTS Disease resistance protein signature 317 331 - -
Vivi5g00537 1098 PRINTS Disease resistance protein signature 648 664 - -
Vivi5g00537 1098 SUPERFAMILY L domain-like 515 839 - -
Vivi5g00537 1098 SMART till_3 42 180 IPR000157 GO:0007165
Vivi5g00537 1098 FunFam Disease resistance protein (TIR-NBS-LRR class) 40 208 - -
Vivi5g00537 1098 MobiDBLite consensus disorder prediction 1075 1098 - -
Vivi5g00537 1098 Pfam TIR domain 43 202 IPR000157 GO:0007165
Vivi5g00537 1098 ProSiteProfiles TIR domain profile. 41 206 IPR000157 GO:0007165
Vivi5g00537 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 470 IPR027417 -
Vivi5g00537 1098 SUPERFAMILY Toll/Interleukin receptor TIR domain 41 183 IPR035897 -
Vivi5g00537 1098 Coils Coil 735 755 - -
Vivi5g00537 1098 Gene3D - 40 202 IPR035897 -
Vivi5g00537 1098 Gene3D - 203 370 IPR027417 -
Vivi5g00537 1098 Gene3D Ribonuclease Inhibitor 559 927 IPR032675 -
Vivi5g00537 1098 Pfam NB-ARC domain 221 455 IPR002182 GO:0043531
Vivi5g00537 1098 SMART AAA_5 238 377 IPR003593 GO:0016887
Vivi5g00537 1098 Gene3D - 375 459 IPR042197 -
Vivi5g00537 1098 MobiDBLite consensus disorder prediction 1082 1098 - -
Vivi5g00537 1098 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 869 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00537 Vivi-Chr5 8875749 8880220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00537 17 765 WRKY Transcription Factor Family AT4G12020 31.682 2.89e-92 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00537 - - cam:101494533 1411.36