Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00527 ATGTCTTCCCCAACAAGTTCCTTTTCTGATGAAGAGACTTCATCCAGAAGAAGAAGAAAGTACGACGTGTTCTTGAGTTTCAGAGGCAAAGATACTCGTGCATCCTTCACTTCACATCTCTATGCTTCTCTTCAAAACGCCGGATTCATCGTCTTCATGGACGATCAATCGCTTCAAAGAGGAAAATTCATCTCGACATCGTTACTGCAAGGAATTAAAGATTCTAGTATTGCCGTCGTTGTATTTTCCAAAAACTATGCAGGTTCCCAATGGTGTATGCGAGAGTTGGTGGAAATTATGGAGTATCGATGTGAGGCGGTACTGCCTGTATTCTACCATGTAGATCCCTCGGAAGTTCGGAATCAGACTGGTGATGTTGGAAAAGTGTTTCGAAATCTTTTGAACAATCACGATGAAAACGAGTATGAGGCTATCGACTGGAAAAATGCTCTTGTTAAGTTAGGTCGCATTGCAGGGTTTGTAGTCTCGAATTACAGGAACGAAGGTGAGGATATCAAGGACATTGTTGAAAAAGTTACACATTTACTTGACAAGACAGACTTGTTTGTTGCTGATCATCCAGTGGGAGTCGAATCTCGAGTGCTAGATATGATTCAACTACTAGACACCCCATTTTCAAATGATGTTCTGCTATTAGGGATGTGGGGTATGGGAGGCATTGGTAAAACAACTATTGCAAAACCCATTTACAATAAAGTTGGCCACAATTTTGAAGCTAGGTGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGCAAGATTTTGGACCAATGTATTTACAAGAACGTATTTTGTATGATATCTTCAAAGAAACTACAACCAAGATACAAAACATTGAATCAGGAAAATCTGCATTAAGGGAAAGACTATGTAATAAAAGAATACTTCTTGTACTTGACGACGTGAATAAATTGGACCAACTCAAAGCTTTGTGTGGAAGTCGTAAATGGTTTGGTCCAGGGAGTAGAATAATCGTCACAACTAGAGATAAGCAAATAATTAGAGGGAATCGAGTTAACCAAGTATACATAATGAAAGAAATGGATGAAAGTGAGTCAATTGAGCTTTTTAGTTGGCATGCATTCAAAAAAGTGAGTCCTAGAGAAAATTTTGCTGAAATTTCTAGAAATGTTGTCAAATATTGTGGGGGATTGCCACTAGCCCTGGAAGTCCTTGGGTCCTATTTGTTTGATAGAGGGGTAACAGAGTGGGAGTGTGTATTGGAGAAACTCAAGAGAATTCCCAATGATCAAGTACATAAGAAGTTGAAAATAAGCTACGACGGTTTAAATGATGATACCGAGAGGGATATATTCCTTGACATAGCTTTTTTCTTTATTGGGATGGACAAAAATGATGTTATGCATATATTAAATGGTTGCGGACTTTTTGCAGAAATTGGAATAAGTGTTCTCGTTGAGCGAAGTCTTGTAAGAGTGGATGGTAAAAACAAACTTGAAATGCATGATTTGATACGAGATATGGGAAGAGAAATCATCCGTGAGATATCACCGAAGAAACTTGAGAAGCGTAGCAGGTTATGGTTTCACGAGGATGTTGTGGATGTATGGTCAGAACAGACTGGAACTCAAGCTGTTGAGGGGCTAGTTTTGAAGTTGACACCTAATGCAAAATGTTTTAGTACCAAATCATTTGAGAACATGAAGAAACTTAGATTGCTTCAACTCGCTGGTGTACAACTTGATGGAGATTTTCAATATCTTTCAAGAAACTTGAGATGGTTGTGTTGGAACGGATTTCCTTTTACATGCATACCTAGAAATTTTTATCAGAGAAACTTAGTTTCCATTGAGTTAGAAAATAGCAATATCAAATTTTTGAAGAAAGAGATGCAGGGGTTGGAGAATCTAAAAATTCTCAATCTTAGTCATTCTCACTATCTGACAGAGACTCCGGACTTTTCCAACATGCCTAATCTTGAAAAGCTAATACTCAAAGATTGTCCAAGGTTGCCTGAGGTTTCCGATACCATTGGACATCTTCACAAAGTACTTCTGATAAATTTGAAAGACTATATTAGCCTTTCTAACCTTCCAAGAACCATCTATACGTTGAAATCGCTAAAAACTCTTATTCTTTCTGGGTGTTTAATGATTGACAAATTGGAAGAGGATTTGGAACAAATGGAATCTTTATCCACTCTGATTGCACATAACACCGCAATAACAAAAGTGCCGTTTTCAATAGCCAGGTCAAAAAACATTGGATATATTTCTTTGTGTGGCTATAAAGGATACTCGCGTGAAGTGATTCCTTCTATCATTCGGTCTTGGATGTCACCAACAAATAACCTCTCATCCTTACTTCAAACACCTGCTAGCATGTCATCTCTTGTTTCTTTAGATGCGTCAAGAAGTAGTTCCCATAGTCTATCATCTATTTCTGAGGTCCTTACAAAGGTTCTAAGTCTTTTGGTAGAGTGCGGCTCAGAACTTCAACTTTCACGAGATGCAATTTTAGATGCTTTAAGTGCAACTAATTCTAAGGAATCGGAATCATCTGCAACTACATCACAAGTATCAGCGGTGAAGACTTCTACATTAATCGAATGTTGTGGTCAAGTGCACATTTCTACAACAAAAAAATCCACGAAGTCTCTTCTAATTCGAATGGGAACAAATTGCCAAACAACCAATATTCTGAAAGAAAGCATCTTACAGAATATGGCGGTCAACGCGTGTGGTGGTTGCTTTCTCCCTGGTGATAGTTATCCGGATTGGTTAACTTTCAATTCCGAAGGTTCTTCTGTAATTTTTATAGTACCGCAAGTGAAAGGGCGCAACTTGAAGACAATGATGTGCTTTGTCTATTCTTCAAGCTCAGATAACATAACATCGGATGGCCTTAAGAATGTGTTGGTGATAAATCACACGAAGACCACCATTCAGCTCTATAAGAGAGAGGCGTTTGCCACCTTTGAAAATGAGGAGTGGCAGAGAGTGGTATCAAATATGGAACCTGGTGACAAAATGGAGATTGTTGTTGTTTTTGACAACGGTTTCATTGTGACGAAGACAACAATTTATCTCATATATGACAAATCAATAGGCAAACAAATGGAGCGATGTTGTGCACTAGATAAGGATGTTCTTGTTGGTAGTGGTGATGAAAATGAATGCGCTGCCAAGACGGTTTCTCTTCTAGTAGAGCCTACAGATGATTTTAAACAAAAACATAAAAGAAGAAAACTTAATTGA 3237 0.3825 MSSPTSSFSDEETSSRRRRKYDVFLSFRGKDTRASFTSHLYASLQNAGFIVFMDDQSLQRGKFISTSLLQGIKDSSIAVVVFSKNYAGSQWCMRELVEIMEYRCEAVLPVFYHVDPSEVRNQTGDVGKVFRNLLNNHDENEYEAIDWKNALVKLGRIAGFVVSNYRNEGEDIKDIVEKVTHLLDKTDLFVADHPVGVESRVLDMIQLLDTPFSNDVLLLGMWGMGGIGKTTIAKPIYNKVGHNFEARCFLANIREVWEQDFGPMYLQERILYDIFKETTTKIQNIESGKSALRERLCNKRILLVLDDVNKLDQLKALCGSRKWFGPGSRIIVTTRDKQIIRGNRVNQVYIMKEMDESESIELFSWHAFKKVSPRENFAEISRNVVKYCGGLPLALEVLGSYLFDRGVTEWECVLEKLKRIPNDQVHKKLKISYDGLNDDTERDIFLDIAFFFIGMDKNDVMHILNGCGLFAEIGISVLVERSLVRVDGKNKLEMHDLIRDMGREIIREISPKKLEKRSRLWFHEDVVDVWSEQTGTQAVEGLVLKLTPNAKCFSTKSFENMKKLRLLQLAGVQLDGDFQYLSRNLRWLCWNGFPFTCIPRNFYQRNLVSIELENSNIKFLKKEMQGLENLKILNLSHSHYLTETPDFSNMPNLEKLILKDCPRLPEVSDTIGHLHKVLLINLKDYISLSNLPRTIYTLKSLKTLILSGCLMIDKLEEDLEQMESLSTLIAHNTAITKVPFSIARSKNIGYISLCGYKGYSREVIPSIIRSWMSPTNNLSSLLQTPASMSSLVSLDASRSSSHSLSSISEVLTKVLSLLVECGSELQLSRDAILDALSATNSKESESSATTSQVSAVKTSTLIECCGQVHISTTKKSTKSLLIRMGTNCQTTNILKESILQNMAVNACGGCFLPGDSYPDWLTFNSEGSSVIFIVPQVKGRNLKTMMCFVYSSSSDNITSDGLKNVLVINHTKTTIQLYKREAFATFENEEWQRVVSNMEPGDKMEIVVVFDNGFIVTKTTIYLIYDKSIGKQMERCCALDKDVLVGSGDENECAAKTVSLLVEPTDDFKQKHKRRKLN 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00527 1078 Gene3D Ribonuclease Inhibitor 532 844 IPR032675 -
Vivi5g00527 1078 ProSiteProfiles TIR domain profile. 19 183 IPR000157 GO:0007165
Vivi5g00527 1078 Gene3D - 190 350 IPR027417 -
Vivi5g00527 1078 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 159 IPR035897 -
Vivi5g00527 1078 PRINTS Disease resistance protein signature 218 233 - -
Vivi5g00527 1078 PRINTS Disease resistance protein signature 295 309 - -
Vivi5g00527 1078 PRINTS Disease resistance protein signature 625 641 - -
Vivi5g00527 1078 PRINTS Disease resistance protein signature 388 402 - -
Vivi5g00527 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 448 IPR027417 -
Vivi5g00527 1078 Pfam TIR domain 20 181 IPR000157 GO:0007165
Vivi5g00527 1078 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 817 IPR044974 GO:0006952
Vivi5g00527 1078 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 185 - -
Vivi5g00527 1078 Gene3D - 353 437 IPR042197 -
Vivi5g00527 1078 SMART till_3 20 157 IPR000157 GO:0007165
Vivi5g00527 1078 Gene3D - 18 189 IPR035897 -
Vivi5g00527 1078 Coils Coil 610 630 - -
Vivi5g00527 1078 SUPERFAMILY L domain-like 494 812 - -
Vivi5g00527 1078 Pfam NB-ARC domain 204 432 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00527 Vivi-Chr5 8687438 8692376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00527 19 818 WRKY Transcription Factor Family AT4G12020 31.001 3.82e-80 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00527 - - lja:Lj0g3v0331109.1 1383.24