Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00459 ATGGAGAACAACACTAAAGATTTGATTTTTAGTAGAAAGAATCAAAAGGGTAGTTTTAGTTTTACATTTTTAGCTTTTCTTGTTCTTCTATCTTCAACTATTCAACCCATTTTGGGAGATTTATGGGATGGTGTTATTGTAACACAATCTGATTTTCAATCTCTACAAGCTATCAAAACTGAACTTATTGACACCAAAGGTGTTCTCAAAACCTGGAATGACAGTGGATTAGGTGCTTGTTCAGGTAACTGGGTTGGAATCAAGTGCTTAAAAGGTGAAGTTATTGCAATTCAGCTTCCTTGGAAGAGCTTATCAGGAAGAATCTCTGAGAAAATTGGCCAACTTCAATCTCTTAGAAAACTAAGTCTTCATGATAACAATCTTGCTGGTTCAATTCCTTTTTCTCTAGGTTTTCTTCCTAATCTAAGAGGTGTTTATCTCTTTAACAACAAGCTTTCAGGTTCTGTTCCTCCTTCTATTGCTAATTTGCCAATGCTTCAAGCTTTTGATGTTAGTCATAATTTGCTTATTGGTAGAATCCCTTTTGGTTTGACAAATTCCAGTAGGGTTTTCAGGGTTAATTTGAGTTATAACAAACTTTCTGGTCCTATTCCTAGTGAAGTAGGTGAGTTTTCAAGGCTTAGGGTTCTTGATTTGTCAAACAATGAAATCAATGGTAGTTTGCCTTTGAGTTTCTCTAATTTAACTTCTCTTGTTTCATTGAATCTTGAGAATAATAGACTTGATGGTGAAATTCCTGATTCTTATGCGAAACTTCGAAATCTAAGTTCATTCAATGTTTCTCACAACAATCTATCTGGTCATGTTCCATTAGTACTTTCCAAAAGATTCAATGCTAGTTCATTTGAAGGAAATTTTGGCTTATGTGGTTACATAAGTTCGAAACCGTGTCGTTCTTCACCGCCGCCACAGTCACCACCACCGCATAATCTTCCGTCTCAATCACCGGAAGAATCTCCGTCGGAGAAACATCACAGGAAATTGAGTACTAAGGACATAATCCTGATAGTAGCAGGTGTTCTTTTGTTGATTTTGCTATTACTATGCTGCTTTTTGCTTTGTTGTTTGGTCAGGAAAAGAGCTTCTTCAAGTAGAAAGAGTGGTAAAGTTGCTAAAGCTGCTGCTTCTGCTAGGAGTTTGGAGAAAGGTGGTGGTGGTGGAGAGGTTGCATCAGGAGGTGAAGCTGGTGGGAAGCTTGTTCACTTTGATGGGCCATTTGTGTTCACTGCTGATGATCTTTTGTGTGCAACGGCGGAGATAATGGGAAAAAGTGCTTATGGAACGGCTTATAAGGCGACGTTGGAAGATGGTAATCAAGTTGCTGTGAAGAGGTTGAGGGAGAAGACTACTAAAGGACATAAGGAGTTTGAAGGTGAAGTTGCTTTGCTTGGAAAAATTAGGCATCCTAATTTGTTAGCTCTTAGAGCTTACTATCTTGGACCTAAAGGAGAGAAGCTTCTTGTGTTTGATTACATGAGTAGAGGAAGCCTAGCATCATTCCTTCATGCTCGTGGCCCGGAAATAATCGTCGAATGGCCAACAAGGATGAAAATAGCAATTGGAATCACCAACGGTCTATCTTGCCTCCACAACCAAGAAAACATAGTACATGGAAATCTCACCTCAAGCAACATACTATTAGACGAGCAAACAAATCCTCACATAACCGATTTCGGTCTTTCAAGACTAATGACAACTTCAGCCAACACAAACATCATTGCCACAGCAGGAAGCCTCGGATACAACGCACCCGAGCTTTCAAAAACAAAGAAACCAACCACGAAAACCGATGTTTACAGCCTCGGCGTCATCCTTTTGGAGCTCTTAACCGGTAAACCGCCCGGGGAACCAACCAATGGCATGGATTTACCTCAATGGGTTGCTTCCATAGTCAAAGAAGAATGGACTAATGAAGTTTTTGATTTGGAACTCATGAGGGATGCACCAGCCATAGGAGATGAGCTTCTTAATACATTGAAATTGGCTTTACATTGTGTCGATCCTTCGCCTTCTGCTAGGCCTGAAGTTAAGCAAGTTTTGCAGCAGTTAGAAGAGATTAAGCCAGAATTGGTTGAAGTTGAAGTTGATGAAGATGGAGCTAAAGTTCAAACAAATGAATAA 2142 0.3964 MENNTKDLIFSRKNQKGSFSFTFLAFLVLLSSTIQPILGDLWDGVIVTQSDFQSLQAIKTELIDTKGVLKTWNDSGLGACSGNWVGIKCLKGEVIAIQLPWKSLSGRISEKIGQLQSLRKLSLHDNNLAGSIPFSLGFLPNLRGVYLFNNKLSGSVPPSIANLPMLQAFDVSHNLLIGRIPFGLTNSSRVFRVNLSYNKLSGPIPSEVGEFSRLRVLDLSNNEINGSLPLSFSNLTSLVSLNLENNRLDGEIPDSYAKLRNLSSFNVSHNNLSGHVPLVLSKRFNASSFEGNFGLCGYISSKPCRSSPPPQSPPPHNLPSQSPEESPSEKHHRKLSTKDIILIVAGVLLLILLLLCCFLLCCLVRKRASSSRKSGKVAKAAASARSLEKGGGGGEVASGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGHKEFEGEVALLGKIRHPNLLALRAYYLGPKGEKLLVFDYMSRGSLASFLHARGPEIIVEWPTRMKIAIGITNGLSCLHNQENIVHGNLTSSNILLDEQTNPHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPTTKTDVYSLGVILLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPAIGDELLNTLKLALHCVDPSPSARPEVKQVLQQLEEIKPELVEVEVDEDGAKVQTNE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00459 713 Gene3D Transferase(Phosphotransferase) domain 1 500 710 - -
Vivi5g00459 713 FunFam Leucine-rich repeat receptor-like kinase 50 159 - -
Vivi5g00459 713 MobiDBLite consensus disorder prediction 306 321 - -
Vivi5g00459 713 SUPERFAMILY Protein kinase-like (PK-like) 426 696 IPR011009 -
Vivi5g00459 713 Gene3D Ribonuclease Inhibitor 190 306 IPR032675 -
Vivi5g00459 713 Gene3D Phosphorylase Kinase; domain 1 428 499 - -
Vivi5g00459 713 Gene3D Ribonuclease Inhibitor 47 189 IPR032675 -
Vivi5g00459 713 SMART LRR_typ_2 235 258 IPR003591 -
Vivi5g00459 713 SMART LRR_typ_2 259 282 IPR003591 -
Vivi5g00459 713 SMART LRR_typ_2 115 136 IPR003591 -
Vivi5g00459 713 SMART LRR_typ_2 139 163 IPR003591 -
Vivi5g00459 713 SMART LRR_typ_2 211 234 IPR003591 -
Vivi5g00459 713 FunFam Leucine-rich repeat receptor-like protein kinase 407 498 - -
Vivi5g00459 713 Pfam Leucine rich repeat N-terminal domain 49 89 IPR013210 -
Vivi5g00459 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 87 693 - -
Vivi5g00459 713 FunFam Pollen receptor-like kinase 1 499 704 - -
Vivi5g00459 713 SUPERFAMILY L domain-like 49 281 - -
Vivi5g00459 713 MobiDBLite consensus disorder prediction 304 331 - -
Vivi5g00459 713 Pfam Leucine rich repeat 212 272 IPR001611 GO:0005515
Vivi5g00459 713 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Vivi5g00459 713 ProSiteProfiles Protein kinase domain profile. 422 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g00459 713 ProSiteProfiles Leucine-rich repeat profile. 213 234 IPR001611 GO:0005515
Vivi5g00459 713 Pfam Protein tyrosine and serine/threonine kinase 426 690 IPR001245 GO:0004672|GO:0006468
Vivi5g00459 713 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 182 304 - -
Vivi5g00459 713 CDD STKc_IRAK 428 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00459 Vivi-Chr5 6905001 6907897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00459 42 695 Receptor kinase-like Gene Family AT3G51740 56.516 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi5g00459 PK_Tyr_Ser-Thr 2.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00459 - - csin:114314620 819.305