Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00437 ATGGGAAGTTGTTGCAGCTGCCAAGTTTCAATTATAGACAAGGTGCATGATGTTGGATTTAATGAATGTAAAACAAAGGATCTTGAATCTACATGTGAAAATGGTGAAGGACAGGTTATGTTGAAGGGATCTTCTAAGTGTGTATCAATGTATAGCCAAAAGGGTACAAAAGGAGTTAATCAAGATGGAATGACAGTTTGGGAGGACTTTGGCGGAGAAAAAGACACGATTTTTTGTAGTGTTTTAGATGGTCATGGCCCTCTAGGGCACAAATTTTCAACACATATACGTGACAAGTTACCTTCCAAACTTGCTACAACATTCAAAATGTCACAACAAAATGTCTCTAAAGACAATGGTTCTAATGCTACAAAGAAAAGCATTAATGGTGATTCATGGGAAGAACATTTTTTTAGTTCATTCAATGATATGGATCAAGATCTTGCTAAGAACATTGACACAGATGGATTTTCTGGTGGTAGCACTGCTATAACTTTAATTAAAAAGGGTGACCAATTGATAATCGGGAATTTAGGTGATTCTCGTGCAGTTCTTTGCACAAAAGCAGATGACAATAATCGTGTTCCTATTCAACTTACGGTTGACTTAAATCCTGATGTTCCAAGTGAAGCTAATAGAGTGATTAAATGTGGAGGTAGAGTTTTTCCAGCGCAAGAAGATCCTGATGTAAATAGAATCTGGTTGCCTGAAGGTGATTGTCCGGGACTAGCAATGACTAGAGCCTTTGGTGACTTTTGCCTAAAAAAGTATGGCCTCTCCTCAGTTCCTGAGATGTTTTACAGAAAACTTTCCAAGAAAGATGAATTTGTTGTTTTGGCCACTGATGGGATATGGAATGTGCTATCAAACAATGAAGTAATAACCCTAGTTGCTTTAGCGCCAAAAAGGTCATTAGCAGCCAAATTGATAGTAAGACGTGCTGTTCAAGTTTGGAAACAAAAGTTTCCACGTTACCATATTGATGATTGTTCAGTCATATGTTTATTCTTCGATGATGATCATTCGGTTAGTGTGGGAGGAAAGAAAAGGCATCGCTAG 1059 0.3777 MGSCCSCQVSIIDKVHDVGFNECKTKDLESTCENGEGQVMLKGSSKCVSMYSQKGTKGVNQDGMTVWEDFGGEKDTIFCSVLDGHGPLGHKFSTHIRDKLPSKLATTFKMSQQNVSKDNGSNATKKSINGDSWEEHFFSSFNDMDQDLAKNIDTDGFSGGSTAITLIKKGDQLIIGNLGDSRAVLCTKADDNNRVPIQLTVDLNPDVPSEANRVIKCGGRVFPAQEDPDVNRIWLPEGDCPGLAMTRAFGDFCLKKYGLSSVPEMFYRKLSKKDEFVVLATDGIWNVLSNNEVITLVALAPKRSLAAKLIVRRAVQVWKQKFPRYHIDDCSVICLFFDDDHSVSVGGKKRHR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00437 352 SMART PP2C_4 37 335 IPR001932 -
Vivi5g00437 352 PANTHER PROTEIN PHOSPHATASE 46 335 IPR015655 GO:0004722|GO:0006470
Vivi5g00437 352 SUPERFAMILY PP2C-like 45 339 IPR036457 -
Vivi5g00437 352 Pfam Protein phosphatase 2C 71 313 IPR001932 -
Vivi5g00437 352 ProSiteProfiles PPM-type phosphatase domain profile. 47 337 IPR001932 -
Vivi5g00437 352 CDD PP2Cc 48 337 IPR001932 -
Vivi5g00437 352 Gene3D - 38 339 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00437 Vivi-Chr5 6506486 6509089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00437 1 338 PP2C-type Phosphatase Gene Family AT5G01700 47.977 7.58e-112 329
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02305 6 101961348 101963734 Vivi5g00437 5 6506486 6509089 PCT