Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00401 ATGGAAAGTTGTTTAACTCATTTGGGGAAGACATGTGTAGAGAAATCGATAAATGGGACATTAGCAAAATTACGTGATGTATTTTGCTTCACATGCATTTCTAATGAAATCAAAGAAGAAAAGGTTTGGCTCGAAGGAGAAATAAAAGCACATGAGAGTTTTCTGTCTAAATATTACATTTCTTTTCCAAGTAGAGAGACAAAATATAAACAGCTGCTCCATGCACTCAAAGATGATAACAACCATATAATCGTATTGCAAGGGAGGGGTGGCATCGGAAAAACTACCTTTGCCAAAAAAGTTAGTGAAGAACTAAAAGAATCTGCACAATTCACTCACGTCATTGAGACAACGGTGTCGTTTACTCCTGATATAAAAAAAGTTCAAGATGCTATTGCTCGAAGTTTAGGAATGGAATGGAAGGAATGGGACTCAGACAGATCGACGAAACTATTGAGCCGAATAAAAAATGGTGAAAATAGTGAGAAAATTCTTCTAATAATGGATAATGTATGGGATCAAGAGTTACCTGTTGATTTACATCTAATAGGAATTCCAAAACCTGGAAAATACGATGGTTGTAAATTTCTTATAATTACACGGAATAAACAAATATCCAGTAAAATGAAATGTGATAAGAAGATTGAATTGGAGCTCTTATCTGAAGAAGAATCATGGACCATGTTCAAAATGTATGCCGGTATAAGCAATAGTCTTTCAAAAAATTTGATCACTAAAGGATTTAAAATTGCCAAGGAATGCAAACAATTACCGGTTGCAATTGTTGTTCTCGCTGGAAGTTTAAAGGGCCAACAACATCGTATGCAGGAGTTGGATGCTACCTTAAAATCCTTGACGAAGATTGTGCCCAAGGACAATGTTGATGCTGAAATGGTTGAAATTTATAAATGTTTGAAGTTTAGCTATGATTATATGAAGGATGAAAAAGCCAAGGGGTTATTTCTCTTATCTTCTATATTTCCAGAAGATAAAGAAATTCCTATTGAAATTTTAACTAGACTTGGAATTGGATCGGGCTTTTTTGAAGATTATGATAGCTACAATGATGTTCGAGACCAAGTAGTTAAAGCCAAAAACAAACTCATAGACTCATGTTTATTGATGGAGGTCAATGAAGAATATGTAAAAGTGCATGAGTTGGTTCGTGAAGTGGCTCAAGAGATTGAAAACAAAGAGATTGGAAGTGTAAATTTGTCGAACAAAGGTAAAGAATCATCTGTTCAAAGGAAAATAAATATTAAATATTTATTTTGTAAAGGGAAGGACACAGATTTGTTTTCCTATAAGTATGGTTCCGAACTTGAGATTCTAGTTCTCGACATGGAAAGAGATGAAGACTGTAAACGTATTGAAGTTTCAGATTCTTTTTTTAAAAATATTGGCAAGCTTCAAGTTTTGTACTTTATTGGTCATGACAAAAGATCGATATCATTTACACGTTCAATTCCATCATTGACAAATATTCGATCTATATTGGTTGATGGAGTTGATTTAGGTGACATCTCTGTTTTTGGAAATCTAAAACGTCTCGAGACTCTTGATTTGGTTAAATGCAAAATCAATGAATTGCCACAAGAAATTGCAGAGTTGTGGAGATTTAAATTGTTAAACTTGGAAGAATGTGAAATTACAACGAATGATCCATTTGAGGTTATCAAAAAATGCTCAAAACTTGAGGAGTTATACTTCATTGATAGTTTTAATGCTTCTTGCCATGAAATAACCATACCCGAGTTGAAAAGGTATCGTATCGGTACAAGGTGGGTGTGGAGTAGGAGCAATTATTTACTATCAAAATGTATGGCTTTTATAGGTCATGATCGTATTCTTTCAAAAGAAACAATCAAGTATTGCATGCAAAAATCAGATAGTTTTCAACTAAATGGAACTTCAATTAAGGAGGAATGGAGAAACCTCGTGCCTGATATTGTTGATGTAGATCAAGGTATGAATGATCTCGTTGAGCTTCGTATGAGCAATCTTTCACAATTAAAGTGTCTCATTGACACAAATGGTATTCAAGTTCCAAGAGTAATATTGTCCAAGTTAGTTGTACTAGAACTAGATGAAATGGAAAGTTTGGAAGTACTATTCAATGGTTCTCTTTCTTTTGATTCTTTGAAGAAATTGGAGACGCTATCAATACGTTACTGTAAAAAGCTTCAAAGATTGTCTACTTTCCAGCTAAATCACTGCAATCTAAAGACCGTGATTCTTCAAAAATGCGCAATGTTGTTTAACCTCTCTTCATTGTTAACTTCTCAGAACCTGATGCTGCTAGAGAAATTGGAAATAGTTGGTTGTGAGAATTTGACAAAGATAATAAAAGATGAAAGAGGAGAAAAGGAATTAAGAGAAGAAATAGATGACGATTATAAATATAACAAGCGTTATGTTCCAATGTTTCCAAAACTAAAAGTTCTTGAAGTTGACAGATGTTGCCAATTAGAATCAATACTTCCTTTGCTTTCCTCTCAAGACCTTCCAGTACTAGAAGCTATAACAGTAAGCGGATGTGATAAGCTCAAATATATATTTGGGAAATATCAACATGTTGAACTCGGTTCACTAAAACATATACTGCGTTGGATATTCCCAAAATTGAAAACACTTTCTGTTAAAAATTGCACGGAATTGAAATACATTTTTGGGAACTACGTCGATGACCATCCAAACCACAATGCAGTTCACCTTCTTCTTCCAGAATTACAATGCATCAATCTTGACTATCTGCGAAGTTTAGTCTCCATATGTCCTGAACAATATCGCACAACATTTCCAAATTTGATACAACTTAAGCTCATTTTTTGCTCTCTGAATAATACATTCGCGGAGTTCCTTTATATATGGAAACGTGCTCAATGCCTTCCAATACATTCAAGTATCACGTGCAATGTTAAAGAGATGACGTTGTCTGGTTCTTCGAAGCTAAGTTCTGTGTTTATGCTTTCTATTAGTGAACGAATGATGGTGGAAACTTTGAGAATTGAGAACTGTGATGAATTGCAGTACATAATAGTAGACGTTGGAGATGAAAGTGATGACATTACTTGGGGCAATGTCTTCCCAAAATTAAAAAGGCTTTTCATTCAAGATTGCAAGAAATTGAAATACATATTTGGACACTACGAATACAATGATGACCATCCTAACCAGAACAAGATTCACCTTCATCTTCCAGTTTTACAATGTCTTCAACTCTGCAATCTGGAAAATTTTGTTGCTATATGTCCTAAACGATATCGCACAACATTTCCACCTTTGATTGAACTTGAACTCGTGGAATGTTCTCCGGATAATACAGTCATACAGGATTTGAGCTTGGAAAATTTTATTCCTTTAAAAAGTCTCGTGGTACATAACTCCAAAGCAGAAAATATTATTAGTCACAATGAAATAGAAAGACAACCAATGAACTTGGGGTTGCAAAAGTCTGAGCTACAAGATCTTCATAATATGACTTGCCTTTTTGTGGGTCCTGAAAATTCTTTTTCCCTACAAAACCTTAAACAAATGATAATTGTGCGTTGTGAAAGATTGGAAATAGCTTTCTCTACTTCTATTTCCATATGCTTACCACAATTGGTTTATCTAAGAATCGAAAATTGCGATGAGTTGAAGTACATCATCAAAGATGACAGGCAGATTCAAAATATAACATGCTTTCCAAAGCTACGAATACTTGTTGTAATAAAGTGTCACAAATTAAAATGTGTCTTTTCGGTCAAGTTACTTCCTCGGTTAATAGCTTTGATGATAAGGGAAGCACATGAGTTAGAAGAAATATTTAAAAGTGAAGCTGATCAAAAAGTCAAGTTACCAATATTACAAGTGGTAGTACTTGAAAACCTACCAAGCCTCTTCCGCACCCAAGAAACTCAATTTCAGGAAGTACGCAGTCGTGTTGTAGAAAATTGCAGAAATCTCTCTTTGACTTCAGCCACAACTAATTATTTCTCATATTGGCTTTTACTCATTGAAATTGGCATAGTTGATCCATATCTTAAAAACTTATTTGCGAGAGCATTTGAGCAATCAAGACAATTAAGAGGTAAGACCAAAGATCAGAAACAATTAAAAGATATTGGTAATGAAAATCCAAGAGCTGAAACCAAAAAAGATACTGCTGTTGGTATTGGGACTGAACATGGAGCAGTATTAGGACACGAGTCGACTTCTTCACAGTTGGAGAAAGAACAACCAACGAGTCAACAAGAAAACCAACAAGATCTACATGGAACAATCAATACTACTCATAAACCCTCTCAGGGTGTTGAAGAAGGACATGCATTAACAAATACTCAGAAAATAACAGTTTCAACTCATTTAGTGTTAGCCAGTGCATCCGAAGTGGGTGAGTTGAAAAAAAAACAACTAATGAGCCAACATGGTTTGAAAACGCAACAAAATGCACTTATAGAAATCACTACTACCGTCAAATTCCCTCAGAAATTGGAAAAAGAACAACCAGCAAGTCAACAAGGTTTGATAAACCAACACGATCTACTTGAAGAAATCACTACTATCGTCAAACCCTCTCAGGAATTTGAAAAGGAACAACCAACAAATCAACAAGGATTGATAAACCAACAAGATCCACTTGAAAAAAACAAGACTATAACCAAAACTTATCAGGGTGTTGGAGATGGAACTACATTAACAATTTTCCAGAAAATAACAGCCCCAACTCATTTAGAGTTAGCCAGATCATCGCATGTGAGTGAGTTTGAGAAGGAACGATCAACGAATCAACAAGGTTTGATAAACCAACAAGATCCACTTGAAAAAAACAAGAGTATAACAAAAACCTCTCAGGAATTGGAAAAAGAAAAACCAACGAGTCAACAAGGTTTTATAAACCAACAAGTTCCACTTGGAGAAATTGTCAAACCCTCTCAGGAGTTTGAGAAGGAACGATCAACGGATCAACAAGGTTTAATAAACCAAAAAGATCCACTAGAAAAAAATAAGAGTATAACAAAAACCTCTCAGGAATTGGAAAAAGAACAACCAACGAGTCAACAAGGTTTGATAAACCAACAAGTTCCACTTGGAGAAGTCGTCAAACCCTCTCAGGAGTTTGAGAAGGAACGATCAACGAATCAACAAGGTTTGATAAACCAACAAGATCCACTTGAAAAAAACAAGAGTATAACAAAAACCTCTCAGGAGTTTGAGAAGGAACGATCAACGGATCAACAAGGTTTAATAAACCAAAAATATCCACTTGAAAAAAATAAGAGTATAACAAAAACCTCTCAGGAATTGGAAAAAGAACAACCAACGAGTCAACAAGGTTTGATAAACCAACAAGTTCCACTTGGAGAAGTCGTCACACCCTCTCAGGAAAGTAATCTAATATAG 5385 0.3493 MESCLTHLGKTCVEKSINGTLAKLRDVFCFTCISNEIKEEKVWLEGEIKAHESFLSKYYISFPSRETKYKQLLHALKDDNNHIIVLQGRGGIGKTTFAKKVSEELKESAQFTHVIETTVSFTPDIKKVQDAIARSLGMEWKEWDSDRSTKLLSRIKNGENSEKILLIMDNVWDQELPVDLHLIGIPKPGKYDGCKFLIITRNKQISSKMKCDKKIELELLSEEESWTMFKMYAGISNSLSKNLITKGFKIAKECKQLPVAIVVLAGSLKGQQHRMQELDATLKSLTKIVPKDNVDAEMVEIYKCLKFSYDYMKDEKAKGLFLLSSIFPEDKEIPIEILTRLGIGSGFFEDYDSYNDVRDQVVKAKNKLIDSCLLMEVNEEYVKVHELVREVAQEIENKEIGSVNLSNKGKESSVQRKINIKYLFCKGKDTDLFSYKYGSELEILVLDMERDEDCKRIEVSDSFFKNIGKLQVLYFIGHDKRSISFTRSIPSLTNIRSILVDGVDLGDISVFGNLKRLETLDLVKCKINELPQEIAELWRFKLLNLEECEITTNDPFEVIKKCSKLEELYFIDSFNASCHEITIPELKRYRIGTRWVWSRSNYLLSKCMAFIGHDRILSKETIKYCMQKSDSFQLNGTSIKEEWRNLVPDIVDVDQGMNDLVELRMSNLSQLKCLIDTNGIQVPRVILSKLVVLELDEMESLEVLFNGSLSFDSLKKLETLSIRYCKKLQRLSTFQLNHCNLKTVILQKCAMLFNLSSLLTSQNLMLLEKLEIVGCENLTKIIKDERGEKELREEIDDDYKYNKRYVPMFPKLKVLEVDRCCQLESILPLLSSQDLPVLEAITVSGCDKLKYIFGKYQHVELGSLKHILRWIFPKLKTLSVKNCTELKYIFGNYVDDHPNHNAVHLLLPELQCINLDYLRSLVSICPEQYRTTFPNLIQLKLIFCSLNNTFAEFLYIWKRAQCLPIHSSITCNVKEMTLSGSSKLSSVFMLSISERMMVETLRIENCDELQYIIVDVGDESDDITWGNVFPKLKRLFIQDCKKLKYIFGHYEYNDDHPNQNKIHLHLPVLQCLQLCNLENFVAICPKRYRTTFPPLIELELVECSPDNTVIQDLSLENFIPLKSLVVHNSKAENIISHNEIERQPMNLGLQKSELQDLHNMTCLFVGPENSFSLQNLKQMIIVRCERLEIAFSTSISICLPQLVYLRIENCDELKYIIKDDRQIQNITCFPKLRILVVIKCHKLKCVFSVKLLPRLIALMIREAHELEEIFKSEADQKVKLPILQVVVLENLPSLFRTQETQFQEVRSRVVENCRNLSLTSATTNYFSYWLLLIEIGIVDPYLKNLFARAFEQSRQLRGKTKDQKQLKDIGNENPRAETKKDTAVGIGTEHGAVLGHESTSSQLEKEQPTSQQENQQDLHGTINTTHKPSQGVEEGHALTNTQKITVSTHLVLASASEVGELKKKQLMSQHGLKTQQNALIEITTTVKFPQKLEKEQPASQQGLINQHDLLEEITTIVKPSQEFEKEQPTNQQGLINQQDPLEKNKTITKTYQGVGDGTTLTIFQKITAPTHLELARSSHVSEFEKERSTNQQGLINQQDPLEKNKSITKTSQELEKEKPTSQQGFINQQVPLGEIVKPSQEFEKERSTDQQGLINQKDPLEKNKSITKTSQELEKEQPTSQQGLINQQVPLGEVVKPSQEFEKERSTNQQGLINQQDPLEKNKSITKTSQEFEKERSTDQQGLINQKYPLEKNKSITKTSQELEKEQPTSQQGLINQQVPLGEVVTPSQESNLI 1794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00401 1794 Pfam NB-ARC domain 66 310 IPR002182 GO:0043531
Vivi5g00401 1794 SUPERFAMILY L domain-like 981 1298 - -
Vivi5g00401 1794 Gene3D - 308 395 IPR036388 -
Vivi5g00401 1794 MobiDBLite consensus disorder prediction 1357 1384 - -
Vivi5g00401 1794 Gene3D Ribonuclease Inhibitor 970 1288 IPR032675 -
Vivi5g00401 1794 MobiDBLite consensus disorder prediction 1741 1794 - -
Vivi5g00401 1794 MobiDBLite consensus disorder prediction 1397 1434 - -
Vivi5g00401 1794 Gene3D - 49 216 IPR027417 -
Vivi5g00401 1794 FunFam Probable disease resistance protein At1g61300 61 214 - -
Vivi5g00401 1794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 322 IPR027417 -
Vivi5g00401 1794 PRINTS Disease resistance protein signature 83 98 - -
Vivi5g00401 1794 PRINTS Disease resistance protein signature 512 528 - -
Vivi5g00401 1794 PRINTS Disease resistance protein signature 158 172 - -
Vivi5g00401 1794 PRINTS Disease resistance protein signature 254 268 - -
Vivi5g00401 1794 MobiDBLite consensus disorder prediction 1724 1740 - -
Vivi5g00401 1794 MobiDBLite consensus disorder prediction 1672 1688 - -
Vivi5g00401 1794 MobiDBLite consensus disorder prediction 1704 1723 - -
Vivi5g00401 1794 MobiDBLite consensus disorder prediction 1587 1605 - -
Vivi5g00401 1794 MobiDBLite consensus disorder prediction 1577 1794 - -
Vivi5g00401 1794 Gene3D - 220 307 IPR042197 -
Vivi5g00401 1794 Gene3D Ribonuclease Inhibitor 403 969 IPR032675 -
Vivi5g00401 1794 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 866 1104 - -
Vivi5g00401 1794 SUPERFAMILY RNI-like 461 852 - -
Vivi5g00401 1794 SUPERFAMILY RNI-like 809 1128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00401 Vivi-Chr5 5732893 5762201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00401 84 424 WRKY Transcription Factor Family AT5G45050 24.566 2.13e-11 67.4