Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00359 ATGCCAAAGAACCTTAGAAAATCCCTTCAACGTTACTTTAGCAAAATCAAAACTCAACATTCACATCAACTCCGTTTACCATCCAAGAAATGGATTAGTCTCAAAAGTTGCAAACATCCTAGAACTCCGTCCTTCTCGATCGAAAACAAAAACAACAAAGACGATGAAGCTACACTGGCCGACATCGACCAATTTCTTTTTGAAAATTTTAAGTCGTTGTTTCTTGATGAGCACGAAGATGCTCACATTAACCAAAACACTAAAAGTGTCGTCAGATCGGATGAAGATGAAGAGAAGGATGAAGAAAAAACTGGTGAAAATAAATCTTCAAAATTAGGACGAATCATTTTTGATTCGTCCGAGGGAGGTTCACCTTTGGATCTTAATGGATCCAATAGATTTTTTACGCCGCGTGGCTTCTCGGGATCCACAACAACATCAACAACAAACACATTTGAAGAAACGGGATCATCCTCAAACTCGTCAACTTCGAAAACTTTTAATATTAATTCGTCTTCAAAGGAAGATAAAATGAATATTCCTAACAATTGTGTTGTTGTGTTGGCTAATTCGCCAAATCCTTATGACGATTTCCGCAAATCTATGCAAGAAAATGTGGAAGCAAGGATTATGAAGAATCAAAGCGTGGATTGGGATTTCATGGAAGAACTTTTGTTTTGTTATATAAACATGAATGAGAAGAAATCGTGTAAGTTTATACTAAGTGCCTTTTGTGACTTAATTAGTGTTATGAGACAGAGTTCGGACACTGAATCAGAGAAAGATCCAGAGAAACCGCGAAGCGTTCGAACCATTAGAAAGGGAAAGGATGTAAGGAAGAAGAAGAATAAAGAATTAACATTATAA 867 0.3656 MPKNLRKSLQRYFSKIKTQHSHQLRLPSKKWISLKSCKHPRTPSFSIENKNNKDDEATLADIDQFLFENFKSLFLDEHEDAHINQNTKSVVRSDEDEEKDEEKTGENKSSKLGRIIFDSSEGGSPLDLNGSNRFFTPRGFSGSTTTSTTNTFEETGSSSNSSTSKTFNINSSSKEDKMNIPNNCVVVLANSPNPYDDFRKSMQENVEARIMKNQSVDWDFMEELLFCYINMNEKKSCKFILSAFCDLISVMRQSSDTESEKDPEKPRSVRTIRKGKDVRKKKNKELTL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00359 288 Pfam Transcriptional repressor, ovate 191 249 IPR006458 -
Vivi5g00359 288 ProSiteProfiles OVATE domain profile. 187 250 IPR006458 -
Vivi5g00359 288 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 61 251 IPR038933 GO:0045892
Vivi5g00359 288 MobiDBLite consensus disorder prediction 85 174 - -
Vivi5g00359 288 MobiDBLite consensus disorder prediction 255 288 - -
Vivi5g00359 288 MobiDBLite consensus disorder prediction 85 109 - -
Vivi5g00359 288 MobiDBLite consensus disorder prediction 255 271 - -
Vivi5g00359 288 NCBIfam uncharacterized plant-specific domain TIGR01568 185 251 IPR006458 -
Vivi5g00359 288 MobiDBLite consensus disorder prediction 124 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00359 Vivi-Chr5 4831742 4832681 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi5g00359 Ovate 1.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00359 - - tpra:123921622 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00359 5 4831742 4832681 Vivi5g00359 5 4831742 4832681 ECH
Vivi2g07868 2 227628051 227629528 Vivi5g00359 5 4831742 4832681 PCT