Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00355 ATGAGTGTGGTGGGATTTGATTTTGGTAACGAGAGTTGCATTGTTGCTGTTGCTAGACAGAGAGGGATTGATGTTGTGTTAAACGATGAATCTCAACGCGAAACCCCGGCGATTGTGTGTTTTGGTGATAAGCAGCGTTTTATTGGTATTGCTGGTGCTGCTTCGACTATGATGAACCCTAAGAATTCAATTTCTCAGATTAAGAGGCTTATTGGGAAGCAGTTTTTGGATGTTGATTTGCAGCGTGATCTTAAGTCTTTGCCTTATAATGTTACTGAAGGACCGGATGGGTATCCGTTGATTCAGGTGAGGTACTTGGGGGAAGTTAGGGCGTATACGCCTACGCAAGTGTTTGCGATGATGTTGTCGAATATGAAAGAGATTGCTGAGAAGAATCTTAACGCGGCTGTTAATGATTGTTGTATTGCGATTCCGGTTTATTTCACTGATCTTCAGAGGAGGGCTGTTTTGGATGCTGCGACTATTGCTGGTTTGAACCCGCTTCGGTTGCTTCATGAGACTACTGCTACTGCATTGGCGTATGGGATTTATAAAACAGATCTGCCGGAGAATGATCAGCTGAATGTGGCTTTTGTGGATATTGGTCATGCTAGTATGCAGGTGTGCATTGCTGGGTTCAAAAAGGGGCAGCTGAAAGTGTTGGCTCATACATTTGACAGGTCACTTGGCGGTAGGGATTTTGATGAGGTTTTGTTTAATCATTTTGCTGGGAAGTTTAAGGAGGAGTACAAAATTGATGTGCTTCAGAATGCCAGAGCCTGTTTGAGGCTTAGGGCTTCTTGTGAGAAGATGAAGAAGATGCTTAGTGCCAATCCGATTGTGCCTCTGAACATCGAGTGCTTGATGGATGAGAAGGATGTTAAGGGTATCATGAAGCGTGAAGAGTTTGAGGAATTGAGTCTCCCGATTTTGGAGCGTGTCAAGGGACCTTTGGAGAAGGCACTTGCAGAAGCAGAACTCTCAGTTGATGATATACATATGGTTGAGGTCGTTGGTTCAGGTTCTCGTGTACCAGCTATAAACAAAATATTGACTGAGTTCTTCAAGAAGGAGCCAAGGAGGACAATGAACGCGAGCGAATGCGTTGCCAAAGGGGCTGCATTGCAATGTGCTATTCTTAGTCCAACTTTTAAAGTGCGAGAATTTCAGGTCAATGAAAGCTTTCCTTTCTCAATCTCTCTAGCATGGAAAGGGTCTGGTCCAGATGCACAGGACGGTGGAACCAATAATCAGCAGAGTTCCCTTGTTTTTCCCAAGGGAAATCCCATTCCAAGTATCAAGGCACTGACATTCTACAGGTCAGGAACATTTTCCATTGATGCACAATATAGTGATGTCAGTGGGCTGCAAACACCTGCTAGGATCAGCACATATACCATTGGACCTTTTGAAGCTAAACAAAGCGAGAAGGCAAAAGTTAAAGTGAAAGTTCGTTTGAATCTGCATGGAATTGCATCTGTTGACTTGGCAACGCTCCTAGAAGAGGAAGAAGTTGAGGTTTCAGATTCCAAACAATCGGCAAAAGAAACTACTAAGGTGGATGCTGATGCTGCCGCACCTCCCACCTCCAATGACAATGATGCTGATGTTAATATGCAAGATGCAAAGCCTAGTGCTGATACCCCTGGGGTTGAAAATGGCGTCCCTGAGTCTGGAAATAAGCCTGCCCAAATGGATGTTGATGAAACCAAGGCTCCAAAGAAAAAGGTCAAGAAAACAAGTGTTCCGATAGCAGAGTTAGTTTATGGAGCAATGACACCTGTGGAAGTCCAGAAAGCTGTAGAGAAGGAGTATGAAATGGCTTTGCAAGATCGCGTGATGGAAGAAACAAAGGACAGGAAAAATGCAGTAGAAGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGACTTTGTCATTGCTTCAGAGAGGGAAGGTTTTACCTCTAAACTTCAGGAGGTGGAAGATTGGCTATACGAGGACGGTGAGGATGAAACTAAAGGTGTATATGTTGCAAAACTTGAAGAGCTCAAAAAGCAAGGTGACCCGATTGAAGAGCGTTACAAAGAATACACAGAGAGGGGTACAATAGTTGATCAGTTCATCTATTGTATAACTAGTTACAGAGAAGCTGCAATGTCACCTGATCCCAAATTTGATCATATTGACATCAGTGAGAAACAGAAGGTCTTAAATGAATGTGTTGAAGCTGAGAATTGGCTAAGGGAGAAGAAGCAGCAGCAGGATTCACTTCCAAAACATGCCAACCCTGTACTCTTGACAGCTGAAATAAGGAAGAAAGCTGAGGCTGTTGATAGGTTCTGCAAGCCGATCATGACAAAACCAAAGCCAGTTAAGCCAGCTACTCCTCCTGCACCACCAAGCCCTGCTTCTTCGGGCTCTGAGCAGCAGCAACCTCAGGCAGATGCTAATGCCAACAGCACCAATGAGAATGCTGGGGATGGGAGTCAGGCCTCATCAGCATCTACTGAACCAATGGAGACCGATAAGCCAGAGAATGCCGGTTCTGCATAA 2547 0.4421 MSVVGFDFGNESCIVAVARQRGIDVVLNDESQRETPAIVCFGDKQRFIGIAGAASTMMNPKNSISQIKRLIGKQFLDVDLQRDLKSLPYNVTEGPDGYPLIQVRYLGEVRAYTPTQVFAMMLSNMKEIAEKNLNAAVNDCCIAIPVYFTDLQRRAVLDAATIAGLNPLRLLHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHTFDRSLGGRDFDEVLFNHFAGKFKEEYKIDVLQNARACLRLRASCEKMKKMLSANPIVPLNIECLMDEKDVKGIMKREEFEELSLPILERVKGPLEKALAEAELSVDDIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGAALQCAILSPTFKVREFQVNESFPFSISLAWKGSGPDAQDGGTNNQQSSLVFPKGNPIPSIKALTFYRSGTFSIDAQYSDVSGLQTPARISTYTIGPFEAKQSEKAKVKVKVRLNLHGIASVDLATLLEEEEVEVSDSKQSAKETTKVDADAAAPPTSNDNDADVNMQDAKPSADTPGVENGVPESGNKPAQMDVDETKAPKKKVKKTSVPIAELVYGAMTPVEVQKAVEKEYEMALQDRVMEETKDRKNAVEAYVYDMRNKLNDKYQDFVIASEREGFTSKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEYTERGTIVDQFIYCITSYREAAMSPDPKFDHIDISEKQKVLNECVEAENWLREKKQQQDSLPKHANPVLLTAEIRKKAEAVDRFCKPIMTKPKPVKPATPPAPPSPASSGSEQQQPQADANANSTNENAGDGSQASSASTEPMETDKPENAGSA 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00355 848 MobiDBLite consensus disorder prediction 504 518 - -
Vivi5g00355 848 FunFam Heat shock 70 kDa protein 4 592 702 - -
Vivi5g00355 848 PANTHER HSC70CB, ISOFORM G-RELATED 1 840 - -
Vivi5g00355 848 Gene3D - 186 360 - -
Vivi5g00355 848 Pfam Hsp70 protein 3 693 IPR013126 GO:0005524|GO:0140662
Vivi5g00355 848 FunFam Heat shock 70 kDa protein 4 38 113 - -
Vivi5g00355 848 Coils Coil 678 698 - -
Vivi5g00355 848 FunFam Heat shock 70 kDa protein 4 230 313 - -
Vivi5g00355 848 Gene3D - 38 113 - -
Vivi5g00355 848 Gene3D - 5 374 - -
Vivi5g00355 848 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Vivi5g00355 848 MobiDBLite consensus disorder prediction 504 574 - -
Vivi5g00355 848 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 625 IPR029047 -
Vivi5g00355 848 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 714 790 IPR029048 -
Vivi5g00355 848 CDD HSPA4_like_NDB 2 381 - -
Vivi5g00355 848 Gene3D - 593 702 IPR029048 -
Vivi5g00355 848 FunFam Heat shock 70 kDa protein 4 1 74 - -
Vivi5g00355 848 Gene3D - 704 786 IPR029048 -
Vivi5g00355 848 MobiDBLite consensus disorder prediction 779 848 - -
Vivi5g00355 848 Gene3D Actin; Chain A, domain 4 230 313 - -
Vivi5g00355 848 FunFam Heat shock 70 kDa protein 4 112 206 - -
Vivi5g00355 848 PRINTS 70kDa heat shock protein signature 332 348 - -
Vivi5g00355 848 PRINTS 70kDa heat shock protein signature 140 160 - -
Vivi5g00355 848 PRINTS 70kDa heat shock protein signature 2 15 - -
Vivi5g00355 848 PRINTS 70kDa heat shock protein signature 30 42 - -
Vivi5g00355 848 PRINTS 70kDa heat shock protein signature 363 383 - -
Vivi5g00355 848 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 594 692 IPR029048 -
Vivi5g00355 848 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 589 IPR029047 -
Vivi5g00355 848 MobiDBLite consensus disorder prediction 802 848 - -
Vivi5g00355 848 MobiDBLite consensus disorder prediction 787 801 - -
Vivi5g00355 848 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00355 Vivi-Chr5 4757789 4762683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00355 4 406 Calmodulin-binding Proteins AT1G16030 36.207 1.23e-84 282