Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00348 ATGATTCAAAATGGTGGAACTGTATCCCAAGGTTCTGTCCTGTGTTATGCTTGTCAAATTCCTGCTAAGGTTGCTGTCTCAAGTATCCGAAGTTTCTGGGGACATAGTTTGGAAAATAAGCCAAGAGGAATGGCATTCACAGACATGTCTGCCACATCAAGCCTACTTTTAAGCGGGGGTCAGAATCTTCTATCTCGTACCATCCCCATGTTACCTAAGCTGCACAAGTCATCTACCACCACTCGGGCAATGAAGAATTCCTCATCTGCCGGCTATCGGTTCCCTCCAATGACAAAAAAACCAAGATGGTGGTGGAGAACATTATCATGCATCCCCTACCTCCTACCTTTCCATCAGGTATGGATGTATGCTCAAACCGCATACCATCTTCACCCGTTTCTCCACTATTTCGAATTCTACACGTACCCTTTTCTCATGGCAATTGGGAGTCTACCTAGATGGTCTCTCATAGCATACTTCTTGATTGCATATCTTACAATTGTGAGGAGAAAAGAATGGCCGCATTTCTTCCGATTCCACGTCGCCGTTGGAATGTTAATCGAGATAGCCCTACAGGTTACTGGGATTGTTAGCCGTTGGATGCCACGTGCGGTCTATTGGGGTCGATTTGGAATGCATTTCTGGACTACTGCGTTTTTTCTTTTTCTCTTTACTACCATAGAGTGCATTAGGTGTGCCCTTGTTGGAATGTATGCCGATATCCCTTTTGTCTGTGATGCGGCATACATTCAAATACCATATGAGTAA 768 0.4453 MIQNGGTVSQGSVLCYACQIPAKVAVSSIRSFWGHSLENKPRGMAFTDMSATSSLLLSGGQNLLSRTIPMLPKLHKSSTTTRAMKNSSSAGYRFPPMTKKPRWWWRTLSCIPYLLPFHQVWMYAQTAYHLHPFLHYFEFYTYPFLMAIGSLPRWSLIAYFLIAYLTIVRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMPRAVYWGRFGMHFWTTAFFLFLFTTIECIRCALVGMYADIPFVCDAAYIQIPYE 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00348 255 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 23 254 IPR005691 -
Vivi5g00348 255 NCBIfam Tic20 family chloroplast protein importer 1 255 IPR005691 -
Vivi5g00348 255 Pfam Chloroplast import apparatus Tic20-like 75 248 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00348 Vivi-Chr5 4695555 4697479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00348 41 251 Chloroplast and Mitochondria Gene Families AT4G03320 34.842 2.86e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00348 - - gmx:100818669 358.992