Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00332 ATGAGCAACTCATTTAAGACTTTCAACAAACAGTTTCCGCTTCTTCCATTTCATCACCATAAATTCCCTCATCATCACTTTTCTTACCCATTCTTCTCACCTTCATCTGTTAATTACTCTTGCACAACCATTTCTTGCTCTCAATCTCGTTCTTCATCACACCCCTCATCTCAATCGACTACAATTATGGACATCTTCAAAGCAATTGCTAAACAAGAGGTTGCAGCTCATGGTAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAATCAGCTCATTTCATCGGCACAAAAGATATCTAATCTCTTGTGTGAAAATGATGTCAAGGGAAATCTTGGAGGAGCTCGAATAGGAATTGTAGCCAAACCGTCTGCCGAATTTGTTGCCGGAATACTTGCAACTTGGTTTAGCGGAGGTGTTGCTGTTCCACTTGCACTCAGCTATCCAGAAGTAGAGCTCCTGTATGTGATGAATAATTCGGATGTGTCTGCAATACTGAGTACTGAAGATCATAGCGAGTTAATGCAACGCATTGCCAACAAAACATCTTCTCGGTTTTTTCATATCCCACCCGTTCCCAACAAGTCCTCCGAGCAGAGCAACAACGGACATTCAAAAAACGGAGAAAGTGATGCAGACAGAATTTTCCTGGAAAACATTGAAAGATCAAGTGAAGATCCAGCACTGATTTTGTACACTAGCGGGACAACCGGTAAACCCAAGGGAGTTGTTCATACACACAGAAGCATCCTTGCTCAGGTCCAAGCCTTGACAAAAGCATGGGAGTACACATCAGCTGATCGGTTTTTGCACTGTCTACCACTACATCATGTCCATGGGCTTTTCAATAGTTTACTGGCCCCTCTCTACGTCGGCTCCACGGTTGAGTTTCTTCCGAAATTTAGTGTCAGTGGAATTTGGAAGAGATGGCGTGAGTCATATCCAACTGAAGGATATGACGCTGATGATGCTATAACTGTATTCACAGGAGTACCAACTATGTACACTCGATTAATACAAGGTTATCATGCCATGGATCCAGAGCTGCAAGCCACTTCTGCATCTAGTGCAAGGAACTTGCGATTAATGATGTGTGGGTCCTCAGCACTTCCCCAACCTGTAATGCAAGAATGGGAATCCATCACTGGACATCGCTTATTGGAGCGATATGGCATGACTGAGTTTGTCATGGCACTATCAAATCCTTTGAAAGGTGAGCGTAAAGCAGGCACCGTTGGCAGACCATTACCTGGTGTGCAGGTCAAGATTCTTGCAGATGAGGATCATGAGAGTGAGGAATCTGGGGTTGGTGACCTTTGCGTCAAAAGCTCTTCATTGTTTAAAGAATATTATAAACTTCCCGAGGTATCGAAGGAATCATTTACAGATGATGGATTCTTTAAGACCGGAGATGCGGTCACTACAGATAAAGATGGATATTTCATCATTTTAGGACGTAAGAACGCGGATATAATCAAGAACGGTGGCTATAAGCTGTCTGCGTTAGAAATTGAATCAGTAATAGTTGAGCATCCAACTGTCTCGGAATGTTGTGTTTTGGGAGTACCGGACAAAGACTACGGAGAAATTGTTTGTGCAATTATTGTGCCAGCCGCAAAGAGCGAAGAAGAGTCAAAGCCTGCTCTAAGCCTAGCAGAGTTATCCACTTGGGCCAAAACTAAACTTGCACCTTACAAGATACCAACTCGACTTATCGTGTGGGAGTCACTTCCTCGCAATGCAATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAGCTGGTGACTTCAGAATAA 1800 0.4317 MSNSFKTFNKQFPLLPFHHHKFPHHHFSYPFFSPSSVNYSCTTISCSQSRSSSHPSSQSTTIMDIFKAIAKQEVAAHGSVAIRADQKSYSYNQLISSAQKISNLLCENDVKGNLGGARIGIVAKPSAEFVAGILATWFSGGVAVPLALSYPEVELLYVMNNSDVSAILSTEDHSELMQRIANKTSSRFFHIPPVPNKSSEQSNNGHSKNGESDADRIFLENIERSSEDPALILYTSGTTGKPKGVVHTHRSILAQVQALTKAWEYTSADRFLHCLPLHHVHGLFNSLLAPLYVGSTVEFLPKFSVSGIWKRWRESYPTEGYDADDAITVFTGVPTMYTRLIQGYHAMDPELQATSASSARNLRLMMCGSSALPQPVMQEWESITGHRLLERYGMTEFVMALSNPLKGERKAGTVGRPLPGVQVKILADEDHESEESGVGDLCVKSSSLFKEYYKLPEVSKESFTDDGFFKTGDAVTTDKDGYFIILGRKNADIIKNGGYKLSALEIESVIVEHPTVSECCVLGVPDKDYGEIVCAIIVPAAKSEEESKPALSLAELSTWAKTKLAPYKIPTRLIVWESLPRNAMGKVNKKELKKLVTSE 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00332 599 MobiDBLite consensus disorder prediction 188 208 - -
Vivi5g00332 599 SUPERFAMILY Acetyl-CoA synthetase-like 53 598 - -
Vivi5g00332 599 Pfam AMP-binding enzyme 77 494 IPR000873 -
Vivi5g00332 599 ProSitePatterns Putative AMP-binding domain signature. 232 243 IPR020845 -
Vivi5g00332 599 Gene3D - 491 599 IPR045851 -
Vivi5g00332 599 PANTHER ACYL-COA SYNTHETASE 53 594 - -
Vivi5g00332 599 FunFam Acyl-CoA synthetase family member 3 71 488 - -
Vivi5g00332 599 Gene3D - 66 488 IPR042099 -
Vivi5g00332 599 MobiDBLite consensus disorder prediction 188 212 - -
Vivi5g00332 599 CDD MCS 79 594 - -
Vivi5g00332 599 Pfam AMP-binding enzyme C-terminal domain 505 586 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00332 Vivi-Chr5 4457036 4463280 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00332 227 598 Monolignol Biosynthesis Gene Families AT4G19010 26.823 2.63e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00332 K18660 - gmx:100813324 884.789