Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00330 ATGAAGGTTCCAACTATGTACATTCGACTAATACAAGGCTATCATGCCATGGATCCAGAGCTGCAAGCCGCTTCTGCATCTGGTGCAAGGAATTTGCGTCTAATGATGAGTGGATCCTCTTCGCTTCCTCAACCTGTTTTGCAAGAATGGGAATCCATCACTGGACATCGCTTATTGGAGCGCTATGGCATGACTGAATTTATCATTGCGCTGTTAAATCCTTTGAAAGGTGAGCGTAAAGCAGGCACCGTTGGCAAACCGTTACCTGGTGTGCAGGTCAAGATTCTTGCAGACGAGGAGCATGAGAGTGGGGAATCGGAGGGTGGCGAGCTTTGCGTTAAAAGCCCTTCATTGTTTAAAGAATATTATAATCTTCCCGAGAAAATGAAGGAATCGTTTACAGATGACGGATTCTTTAAGACCGGAGATGTTGTCACTACAGATAAAGACGGATATTTCATCATTTTAGGACGAAAGAACGCGGATATAATCAAGAACGGTGGCTATAAGCTGTCTGCATTAGAAATTGAATCAGTAATAGTAGAGCATCCAGCAGTTTCGGAATGTTGTGTTTTGGGAATACCGGACAAAGTCTACGGAGAAATTGTTTGTGCAATCATCGTGCCAGCCGCAAAGAGCGAAGAAGAGTCGAAGCTTGCTCTAAGCCTAGTAGAGTTATCCACTTGGGCCAAAACTAAACTTGCACCTTACAAGATACCAACTCGACTTATCGTGTGGGAGTCACTCCCTCGCAATGCAATGGGGAAGGTAAACAAAAAAGACCTGAAGAAGTTGGTGACTTCAGAATGA 810 0.442 MKVPTMYIRLIQGYHAMDPELQAASASGARNLRLMMSGSSSLPQPVLQEWESITGHRLLERYGMTEFIIALLNPLKGERKAGTVGKPLPGVQVKILADEEHESGESEGGELCVKSPSLFKEYYNLPEKMKESFTDDGFFKTGDVVTTDKDGYFIILGRKNADIIKNGGYKLSALEIESVIVEHPAVSECCVLGIPDKVYGEIVCAIIVPAAKSEEESKLALSLVELSTWAKTKLAPYKIPTRLIVWESLPRNAMGKVNKKDLKKLVTSE 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00330 269 SUPERFAMILY Acetyl-CoA synthetase-like 3 268 - -
Vivi5g00330 269 Gene3D - 161 269 IPR045851 -
Vivi5g00330 269 Gene3D - 1 158 IPR042099 -
Vivi5g00330 269 Pfam AMP-binding enzyme 3 164 IPR000873 -
Vivi5g00330 269 Pfam AMP-binding enzyme C-terminal domain 175 256 IPR025110 -
Vivi5g00330 269 PANTHER ACYL-COA SYNTHETASE 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00330 Vivi-Chr5 4247492 4249486 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00330 30 268 Monolignol Biosynthesis Gene Families AT4G19010 27.236 2.00e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00330 K18660 - vvo:131601199 525.013