Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00328 ATGAGCCACTCATTTCAGACATTCAACAAACAGTTTCCTCTTCTTCCATTTCATCATCTTCATCATGATCATAGATTTCCTCACCATCACTTTTCTTATCCGTTGTTGCCACCTTCCTCTGTTAACTACTCTTACACAACCACTATCTCTTGCTCTCAATCTCGTTCTTCATCACATTCCTCCTCAATTGCGAAACAAGAAGTTGCAAGTCATGAAAGTGTTGCTATCAGAGTTGATCAGAAGAGTTATAGTTACAATCAGCTTATCTCATCGGCACAAAAGCTATCTAATCTCTTGTGTGAAAATGATGTCAAGGGAAATCTTGCAGGAGCTCGAGTAGGAATTGTAGCCAAACCATCTGCAGAATTTGTTGTCGGAATACTTGCAATTTGGTTTAGCGGAGGTGTTGCTGTTCCACTTGCACTCAGCTTTCCAGAAGTAGAGCTCCTGTATGTGATAAATAATTCGGATGTGTCTGCAATACTGAGTACCGAAGATCATAGCGAGTTAATGCAAAGCATTGCCAACAAAACATCATCTCGGTTTTTTCATATTCCGCCCGTTCCTAATAAGTCCTCAGAGAAAAGCAATAATAAGCATTCACAAAATGGAAAACTTGACACAGACAGAATTTTCCTGGAAAATATCGGAAAATCTATTGAAGATCCAGCATTGATAATATACACTAGCGGCACAACAGGTAAGCCTAAGGGAGTTGTTCATACACACAGAAGCATCCTTGCTCAGGTCCAAGCATTGACAAAAGCATGGGAGTTTACATCAGCTGATCGGTTTTTGCATTGTCTACCACTACATCATGTCCACGGGCTTGTCAAGGGTTTACTAGCCCCTCTCTACGTCGGTTCCACGGTTGAGTTTCTTCCGAAATTTAGTGTCAGTGGAATTTGGAAGAGATGGCGCGAGTCATATCCAACTGATGGACACAAGGCTGATGACGCTATAACTATATTCACCGGAGTTCCGACTATGTACATTCGACTAATACAAGGCTATCATGCCATGGATCCCGAGCTGCAAGTCGCTTCTGCATCTGGTGCGAGGAACTTGCGTCTAATGATGAGTGGATCCTCTTCGCTTCCTCAACCTGTTTTGCAAGAATGGGAATCCATCACTGGACATCGCTTATTGGAGCGCTATGGCATGACTGAATTTATTATTGCGCTGTTAAATCCTTTGAAAGGTGAGCGTAAAGCAGGCACCGTTGGCAAACCGTTACCTGGTGTGCAGGTCAAGATTCTTGCAGACGAGGAGCATGAGAGTGGGGAATCGGGGGGTGGCGAGCTTTGCGTCAAAAGCCCTTCATTGTTTAAAGAATATTATAATCTCCCCGAGAAAACGAAAGAATCGTTTACAGATGATGGATTCTTTAAGACCGGAGATGTTGTCACTACAGATAAAGATGGATATTTCATCATTTTAGGACGTAAGAACGCGGATATAATCAAGAACGGTGGCTATAAGCTGTCTGCATTAGAAATTGAATCAGTAATAGTTGAGCATCCAGCAGTCTCAGAATGTTGTGTTTTGGGCATACCGGACAAAGTCTACGGAGAAATTGTTTGTGCAATTATCGTGCCAGCCGCAAAGAGCGAAGAAGAGTCGAAGCCTGCTCTAAGCCTAGCAGAGTTATCCACTTGGGCCAAAACTAAACTTGCACCTTACAAGATACCAACTCGACTTATCGTGTGGGAGTCGCTCCCTCGCAATGCAATGGGGAAGGTAAACAAAAAAGAGCTGAAGAAGTTGGTGAGTTCAGAATGA 1782 0.4304 MSHSFQTFNKQFPLLPFHHLHHDHRFPHHHFSYPLLPPSSVNYSYTTTISCSQSRSSSHSSSIAKQEVASHESVAIRVDQKSYSYNQLISSAQKLSNLLCENDVKGNLAGARVGIVAKPSAEFVVGILAIWFSGGVAVPLALSFPEVELLYVINNSDVSAILSTEDHSELMQSIANKTSSRFFHIPPVPNKSSEKSNNKHSQNGKLDTDRIFLENIGKSIEDPALIIYTSGTTGKPKGVVHTHRSILAQVQALTKAWEFTSADRFLHCLPLHHVHGLVKGLLAPLYVGSTVEFLPKFSVSGIWKRWRESYPTDGHKADDAITIFTGVPTMYIRLIQGYHAMDPELQVASASGARNLRLMMSGSSSLPQPVLQEWESITGHRLLERYGMTEFIIALLNPLKGERKAGTVGKPLPGVQVKILADEEHESGESGGGELCVKSPSLFKEYYNLPEKTKESFTDDGFFKTGDVVTTDKDGYFIILGRKNADIIKNGGYKLSALEIESVIVEHPAVSECCVLGIPDKVYGEIVCAIIVPAAKSEEESKPALSLAELSTWAKTKLAPYKIPTRLIVWESLPRNAMGKVNKKELKKLVSSE 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00328 593 Gene3D - 485 593 IPR045851 -
Vivi5g00328 593 Pfam AMP-binding enzyme C-terminal domain 499 580 IPR025110 -
Vivi5g00328 593 CDD MCS 72 588 - -
Vivi5g00328 593 PRINTS AMP-binding signature 221 232 IPR020459 -
Vivi5g00328 593 PRINTS AMP-binding signature 233 241 IPR020459 -
Vivi5g00328 593 SUPERFAMILY Acetyl-CoA synthetase-like 5 592 - -
Vivi5g00328 593 PANTHER ACYL-COA SYNTHETASE 58 588 - -
Vivi5g00328 593 ProSitePatterns Putative AMP-binding domain signature. 226 237 IPR020845 -
Vivi5g00328 593 Gene3D - 62 482 IPR042099 -
Vivi5g00328 593 Pfam AMP-binding enzyme 70 488 IPR000873 -
Vivi5g00328 593 FunFam Acyl-CoA synthetase family member 3 65 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00328 Vivi-Chr5 4210880 4221919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00328 221 592 Monolignol Biosynthesis Gene Families AT4G19010 27.907 1.62e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00328 K18660 - gmx:100813324 842.032