Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00299 ATGGGGTGGTTAAAGTCACCTTGTAAGGGGATTGTGAATGATATAAGAGGAAGATCACAGTGTTATAAAGATGATTGGACTTGTGCTTTTCGTTCCGGTATTGGGATATTGGCTCCAACTACCTATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCCTTTGGTGAACAGCTGAGTAGAGACACAGATGGAAGATTGAGTACAGTAGAAACATTAGCTTCTACAGCCATATGTGGAATTATACACTCAGTTATTGGAGGACAACCACTTCTTATTGTAGGAGTTGCAGAACCAACCATCATCATGTATACCTATTTGTATAACTTTGCCAAGAATAGAGATGGTTTGGGACAAGAACTCTTTTTGGCTTGGGCTGGATGGGTTTGTGTATGGACTTCTCTCTTGCTTTTTGTTCTAGCAATATTCAATGCTGGCAATATCATCAACAGATTTACTAGGGTTGCTGAAGAGCTTTTCGGCATGTTGATTTCGGTCTTGTTCGTTCAAGAGGCTATTAAGGGAATAATAAAGGAGTTTAGTGTTCCTAAAAATGAAAACTCAAAATTAGAGCAATACCAGTTTCACTGGCTTTATGTGAATGGCTTATTAGGTGTTATATTCACATTTGGCCTTCTATATACAGCACTGAAGAGTAGAAGAGCAAGATCATGGTTATATGGGACAGGATGGTTGAGAAGCTTTATTGCAGACTATGGTGTCCCTTTCTTGGTGGTAGTATGGACATTTGTGTCATTCTCAGGGCCAAGAGAAATACCTTCTGAAATTCCAAGAAGACTAGTTGCACCTCTTGCTTGGGAGTCTACATCTTTACACCATTGGACAGTTATCAAAGACATGGGGAAGGTTTCTCCAACATATATTTTTGCTGCTTTTATTCCTGCCTTGATGGTAGCAGGACTTTACTTCTTTGATCATAGTGTTGCTTCGGGGATGGCACAACAGAAAGACTTCAATCTCAAGAAACCTTCTGCGTATCATTACGACATATTCTTACTCGGATTCATGACTTTGCTTTGTGGACTACTTGGATTACCACCTTCGAACGGTGTTCTTCCTCAATCCCCTATGCACACCAAAAGCCTTGCAGTTCTCAAGGGTCTGATGATCAGAAGAAAGATGGTTGAAAGTGCGAAAGAAAGCATAAGAAAAAAAGCTAGTAACACTGAAATCTATGGAAAAATGCAAGCGGTGTTCGTAGAAATGGACAGTAGCAGCCATGTTACTTCTGTGGAAAGAGAGTTAGAGAACTTAAAAGAGGTAGTCCTAAAAGGCGAAGATAAAGGAGACAACAAGAAAGATACATTTGATCCTGAGAAGCATATTGATGCATGTTTGCCTGTTAGAGTAAATGAGCAAAGAATCAGCAATCTTTTGCAATCACTCTTTGTTGGAGCATCAGTTTTTGCTATGCCTGTCATAAAAAAGATTCCGACTTCGGTTTTATGGGGATACTTTGCATACATGGCCATTGATAGTCTTCCTGGTAACCAGTTCTGGGAAAGGATACTACTTCTCTTCGTAACGCCTAGTAGATGGTTCAAGTTATTGGAGGGTCATCATGCTTCCTTTGTGGAATCAGTTCCAATTAGAAACATAGTCTTCTTCACAATACTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTGACATGGGTTCCTATAGCTGGAATATTGTTCCCTTTGCCTTTCTTTTTACTGATTTTAGTGAGGCAATATATTCTCCCTAAGTTGTTTAGTCTTCATCATCTAAGAGAACTTGATGCAGCTGAATATGAAGAAATTGCTGGTGCTCCGAGACTCTCTATGGATTCACCTAGTTTTGCATCTAGGGAATTGTCTGATAGTGAAATATTAGATGAATTGACTACTAGCAGAGGAGAGTTGAAGGTCAGAACTCTAAGCTTTAAAGAGGAAAGACATGGTCAAGTGATCTATCCTAATGAAATAGTATGTGAAAATGAATCATCAAATAGTTAA 1998 0.3904 MGWLKSPCKGIVNDIRGRSQCYKDDWTCAFRSGIGILAPTTYIFFASALPVIAFGEQLSRDTDGRLSTVETLASTAICGIIHSVIGGQPLLIVGVAEPTIIMYTYLYNFAKNRDGLGQELFLAWAGWVCVWTSLLLFVLAIFNAGNIINRFTRVAEELFGMLISVLFVQEAIKGIIKEFSVPKNENSKLEQYQFHWLYVNGLLGVIFTFGLLYTALKSRRARSWLYGTGWLRSFIADYGVPFLVVVWTFVSFSGPREIPSEIPRRLVAPLAWESTSLHHWTVIKDMGKVSPTYIFAAFIPALMVAGLYFFDHSVASGMAQQKDFNLKKPSAYHYDIFLLGFMTLLCGLLGLPPSNGVLPQSPMHTKSLAVLKGLMIRRKMVESAKESIRKKASNTEIYGKMQAVFVEMDSSSHVTSVERELENLKEVVLKGEDKGDNKKDTFDPEKHIDACLPVRVNEQRISNLLQSLFVGASVFAMPVIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWFKLLEGHHASFVESVPIRNIVFFTILQCVYFLVCFGVTWVPIAGILFPLPFFLLILVRQYILPKLFSLHHLRELDAAEYEEIAGAPRLSMDSPSFASRELSDSEILDELTTSRGELKVRTLSFKEERHGQVIYPNEIVCENESSNS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00299 665 FunFam probable boron transporter 2 18 60 - -
Vivi5g00299 665 Pfam HCO3- transporter family 454 544 IPR011531 GO:0006820|GO:0016020
Vivi5g00299 665 Pfam HCO3- transporter family 200 371 IPR011531 GO:0006820|GO:0016020
Vivi5g00299 665 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016020
Vivi5g00299 665 PANTHER ANION EXCHANGE PROTEIN 6 602 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vivi5g00299 665 Gene3D Helical hairpin bin 18 60 - -
Vivi5g00299 665 Coils Coil 414 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00299 Vivi-Chr5 3898527 3901866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00299 5 657 Antiporters AT1G74810 68.675 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00299 K24194 - gmx:100811184 1051.2