Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00220 ATGCAGTTTTCTACAAAGGATGCTGCAGAGAGAACGGCATCTTCTGTTGTCAAAGGATTGCTTAAGAAAGACGGTATCCATGGTTTGTATAAAGGGTTTGCGACGGTCCTTACTGGAACAATACCTGCCAGAATCGTATTTCTCACTTTCTTAGAGACCATTAAGGAAGCTTCCTTCAAGATGGTTAAACCGTTTGAACTATCTGAAACTATTAAGGCTGCCATAGCGAATGGCATTGTAGGCATGGCATCGTCGCTTGTGTCACAAGCTGTGTATACTCCAATTGATGTGATTCGCCAAAAGTTGATGGTGAAAGGATGCTCAGGCCATGCCCAGTATAGTAGTGGTTTGGATGTTGCTTGGAAGTTGATAAGGTCTGAGGGCTTCAGGGGACTATACAGAGGGTTTACCTTGTTAATACAAAACCTGTTGGCCATCAGTTTTATTTGTCCTCCCTCTTGGTGTGTTATTTCCATTTCCATATGGAATCAGTGCTTTGTTTAG 504 0.4266 MQFSTKDAAERTASSVVKGLLKKDGIHGLYKGFATVLTGTIPARIVFLTFLETIKEASFKMVKPFELSETIKAAIANGIVGMASSLVSQAVYTPIDVIRQKLMVKGCSGHAQYSSGLDVAWKLIRSEGFRGLYRGFTLLIQNLLAISFICPPSWCVISISIWNQCFV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00220 167 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 57 IPR018108 -
Vivi5g00220 167 Pfam Mitochondrial carrier protein 2 60 IPR018108 -
Vivi5g00220 167 Pfam Mitochondrial carrier protein 75 140 IPR018108 -
Vivi5g00220 167 SUPERFAMILY Mitochondrial carrier 11 149 IPR023395 -
Vivi5g00220 167 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 143 - -
Vivi5g00220 167 Gene3D Mitochondrial carrier domain 1 150 IPR023395 -
Vivi5g00220 167 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 160 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00220 Vivi-Chr5 2733796 2736561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00220 1 140 Chloroplast and Mitochondria Gene Families AT5G15640 63.571 1.73e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00220 K15121 - gmx:100819519 190.66