Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00219 ATGCAGTTTTCTACAAAGGATGCTGCAGAGAGAACGGCATCTTCTGTTGTCAAAGGATTGCTTAAGAAAGACGGTATCCATGGTTTGTATAAAGGGTTTGCGACGGTCCTTACTGGAACAATACCTGCCAGAATCGTATTTCTCACTTTCTTAGAGACCATTAAGGAAGCTTCCTTCAAGATGGTTAAACCGTTTGAACTATCTGAAACTATTAAGGCTGCCATAGCGAATGGCATTGTAGGCATGGCATCGTCGCTTGTGTCACAAGCTGTGTATACTCCAATTGATGTGATTCGCCAAAAGTTGATGGTGAAAGGATGCTCAGGCCATGCCCAGTATAGTAGTGGTTTGGATGTTGCTTGGAAGTTGATAAGGTCTGAGGGCTTCAGGGGACTATACAGAGGGTTTACCTTGTTAATACAAAACCTGTTGGCCATCAGGTAG 444 0.4369 MQFSTKDAAERTASSVVKGLLKKDGIHGLYKGFATVLTGTIPARIVFLTFLETIKEASFKMVKPFELSETIKAAIANGIVGMASSLVSQAVYTPIDVIRQKLMVKGCSGHAQYSSGLDVAWKLIRSEGFRGLYRGFTLLIQNLLAIR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00219 147 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 57 IPR018108 -
Vivi5g00219 147 Pfam Mitochondrial carrier protein 75 138 IPR018108 -
Vivi5g00219 147 Pfam Mitochondrial carrier protein 2 60 IPR018108 -
Vivi5g00219 147 Gene3D Mitochondrial carrier domain 1 144 IPR023395 -
Vivi5g00219 147 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 147 IPR018108 -
Vivi5g00219 147 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 140 - -
Vivi5g00219 147 SUPERFAMILY Mitochondrial carrier 11 140 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00219 Vivi-Chr5 2733316 2736559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00219 1 140 Chloroplast and Mitochondria Gene Families AT5G15640 63.571 4.81e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00219 K15121 - gmx:100819519 190.66