Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00147 ATGTCGGGGCAATCACAGCGTTTGAATGTGGTCCCCACAGTGACAATGCTTGGAGTGGTGAAAGCACGTTTGGTTGGAGCAACAAGAGGCCATGCTCTTCTGAAGAAGAAAAGTGATGCTTTAACTGTTCAGTTTCGTCAGATCCTGAAAAAGATTGTTTCGACAAAGGAATCGATGGGCGACATAATGAAAACCTCGTCCTTTGCTTTGACCGAGGCTAAGTATGTAGCTGGGGACAACATCAAGCACGTCGTGCTTGAGAATGTTAAAGAAGCTTCACTCAGGGTGCGTTCTCGTACTGAGAACGTTGCTGGAGTGAAGCTTCCGAAGTTTGATTATACTGCTGATGGTGAGGCCTCGAAGAATGACTTGACTGGATTGGCTAGAGGTGGTCAGCAGGTGCAGCAGTGCCGTGTCGCTTATATTAAGGCGATTGAGGTTCTCGTTGAGCTTGCGTCGCTTCAGACATCTTTCCTTACCCTTGATGATGCTATCAAGACTACTAACCGTAGGGTTAATGCTCTGGAGAATGTCGTTAAGCCGCGGTTGGAGAATACTATTAGTTACATCAAGGGTGAGTTGGATGAGCTTGAGAGAGAGGATTTCTTCAGGTTGAAGAAGATTCAGGGTTATAAGAGGAGGGAAATTGAAAGGAAGATGATACTTGCTAGGGAGCAACAAGCTATTGAGAAGTTGCAATTGCAGAAAGGAGGGACTTGGGTTTCTTATGATTCGTCTCAGAACTTGTTGTCTGGTACCGCTGATAAAGACGAGGATATCCTTTTCTAA 789 0.455 MSGQSQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRTENVAGVKLPKFDYTADGEASKNDLTGLARGGQQVQQCRVAYIKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKRREIERKMILAREQQAIEKLQLQKGGTWVSYDSSQNLLSGTADKDEDILF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00147 262 FunFam V-type proton ATPase subunit D 1 199 - -
Vivi5g00147 262 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Vivi5g00147 262 NCBIfam V-type ATP synthase subunit D 9 212 IPR002699 GO:0046961
Vivi5g00147 262 Coils Coil 180 200 - -
Vivi5g00147 262 Gene3D - 1 199 - -
Vivi5g00147 262 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 262 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00147 Vivi-Chr5 1857106 1858581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00147 1 262 Primary Pumps ATPases(2) AT3G58730 78.113 5.88e-152 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00147 K02149 - gmx:100801612 434.106