Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00146 ATGACAAAAAAACCTCAAAAAAACAATAACAATCTGATCCATCAATTTCCTTTGCACTTTCACTTCTCTCTCTTGATCATTCTCCGTTCTCGATCTCCGATCAGCAACTTCAGTAGAAGAGAGAAAAGGAAAAAAGAAGAGATGTCGGGGCAATCACAGCGTTTGAATGTGGTCCCCACAGTGACAATGCTTGGAGTGGTGAAAGCACGTTTGGTTGGAGCAACAAGAGGCCATGCTCTTCTGAAGAAGAAAAGTGATGCTTTAACTGTTCAGTTTCGTCAGATCCTGAAAAAGATTGTTTCGACAAAGGAATCGATGGGCGACATAATGAAAACCTCGTCCTTTGCTTTGACCGAGGCTAAGTATGTAGCTGGGGACAACATCAAGCACGTCGTGCTTGAGAATGTTAAAGAAGCTTCACTCAGGGTGCGTTCTCGTACTGAGAACGTTGCTGGAGTGAAGCTTCCGAAGTTTGATTATACTGCTGATGGTGAGGCCTCGAAGAATGACTTGACTGGATTGGCTAGAGGTGGTCAGCAGGTGCAGCAGTGCCGTGTCGCTTATATTAAGGCGATTGAGGTTCTCGTTGAGCTTGCGTCGCTTCAGACATCTTTCCTTACCCTTGATGATGCTATCAAGACTACTAACCGTAGGGTTAATGCTCTGGAGAATGTCGTTAAGCCGCGGTTGGAGAATACTATTAGTTACATCAAGGGTGAGTTGGATGAGCTTGAGAGAGAGGATTTCTTCAGGTTGAAGAAGATTCAGGGTTATAAGAGGAGGGAAATTGAAAGGAAGATGATACTTGCTAGGGAGCAACAAGCTATTGAGAAGTTGCAATTGCAGAAAGGAGGGACTTGGGTTTCTTATGATTCGTCTCAGAACTTGTTGTCTGGTACCGCTGATAAAGACGAGGATATCCTTTTCTAA 930 0.4409 MTKKPQKNNNNLIHQFPLHFHFSLLIILRSRSPISNFSRREKRKKEEMSGQSQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRTENVAGVKLPKFDYTADGEASKNDLTGLARGGQQVQQCRVAYIKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKRREIERKMILAREQQAIEKLQLQKGGTWVSYDSSQNLLSGTADKDEDILF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00146 309 Gene3D - 47 246 - -
Vivi5g00146 309 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 48 309 IPR002699 GO:0046961
Vivi5g00146 309 NCBIfam V-type ATP synthase subunit D 56 259 IPR002699 GO:0046961
Vivi5g00146 309 FunFam V-type proton ATPase subunit D 48 246 - -
Vivi5g00146 309 Pfam ATP synthase subunit D 65 256 IPR002699 GO:0046961
Vivi5g00146 309 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00146 Vivi-Chr5 1857066 1858581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00146 48 309 Primary Pumps ATPases(2) AT3G58730 78.113 6.62e-151 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00146 K02149 - gmx:100801612 434.106