Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00138 ATGTCTTTGAAGATTGCAGCTGAAAACTGGCCAAGATCATCATCAAAGAAAGTTGAAGAATCATTGATAGTGATAAGAGAGTATGATGAAGTGAAACACAAAGTGGCAGTAGAGAATTTGGAGAGACTTTGTGAAGTTGGACAGAGAGGAAAACCTTCTCTTGTCACTGATTTGTTGGGCGATCCTATATGCCGAATTCGTCTCTTCCCGTTACATGTCATGCTGGTTGCTGAATTCGGCGAAGGAGGAGAAGTTGTTGGAGTGATAAGAGGATGTGTGAAAACAGTTACAAGAGGGAATTTAGCTTATGTGAAACTTGCTTATGTTTTAGGCCTAAGAGTTTCTCCGAAACACAGGAGATTTGGCATTGGAACAAAACTAGTAGAACATTTAGAAGAATGGTGCAAGCAAAAAGAGGCCAAGTATGCATATATGGCAACAGATTGTACAAATGAACCATCCATCAATTTGTTCACAAAAAAATGTGGTTACTCAAAATTCAGAACACTAACAATGCTAGTGCAACCGGTTCATGCTCACTACAAGTCAATCAGCACAAACATTTCCGTCCTTCGTCTACCGCCGCGCCTAGCCGGGCCGACCTATAACCATATTTTCACCAACTCCGAATTTTTCCCTAAAGACATAGACATGATTTTATCTAACAAACTTAATTTGGGCACATTCATGGCCATCCCAAGAAAATACCTAACCAAATGTGATCTAAAAAAGGGTATTTTTCCTCCTAGCTATGCAATGTTAAGTGTGTGGAACACAAAAGAAGTGTTCAAATTGCAAGTTAAAGGAGTGTCACCATTTGTGCATGCATGTTGTGTAGGTACAAGATTGTTAGATAAATGTATGCCATGGTTAAGGTTACCTTCATTTCCTAATGTTTTTAGGCCATTTGGGATTTATGTAATGTATGCATTACACATGGAGGGTAAATATGGAAAACAACTAATGAAGTCATTATGTGGATTTGTTCATAATATGGCTAAAGATGATGGTGATTGTGGGACCATTGTGGCTGAGGTTAGTCAAAGGGACCCAGTTAAGGAAGCTGTCCCACATTGGAGGAAATTTTCTTGGGCAGAAGACATGTGGTGCATTAAGAATCTTGAGGACATGAAGAAGGAATGTGGACCCTTTGATTGGTTTGATTATAAATCATTTTCAGATGTAATTTTTGTTGATCCTCGTGATTTTTGA 1212 0.3878 MSLKIAAENWPRSSSKKVEESLIVIREYDEVKHKVAVENLERLCEVGQRGKPSLVTDLLGDPICRIRLFPLHVMLVAEFGEGGEVVGVIRGCVKTVTRGNLAYVKLAYVLGLRVSPKHRRFGIGTKLVEHLEEWCKQKEAKYAYMATDCTNEPSINLFTKKCGYSKFRTLTMLVQPVHAHYKSISTNISVLRLPPRLAGPTYNHIFTNSEFFPKDIDMILSNKLNLGTFMAIPRKYLTKCDLKKGIFPPSYAMLSVWNTKEVFKLQVKGVSPFVHACCVGTRLLDKCMPWLRLPSFPNVFRPFGIYVMYALHMEGKYGKQLMKSLCGFVHNMAKDDGDCGTIVAEVSQRDPVKEAVPHWRKFSWAEDMWCIKNLEDMKKECGPFDWFDYKSFSDVIFVDPRDF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00138 403 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016747
Vivi5g00138 403 Pfam Acetyltransferase (GNAT) family 75 164 IPR000182 GO:0016747
Vivi5g00138 403 FunFam Putative N-acetyltransferase HLS1 38 169 - -
Vivi5g00138 403 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 19 403 - -
Vivi5g00138 403 CDD NAT_SF 74 144 - -
Vivi5g00138 403 Gene3D - 19 169 - -
Vivi5g00138 403 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 63 170 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00138 Vivi-Chr5 1798854 1801242 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi5g00138 Acetyltransf_1 4.9e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00138 - - tpra:123923406 730.324