Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00127 ATGGCTGCTTCTAGCTCTTCCTCATTCTTCATACTACTAACCTTCTTCTTCCTCCTTCTTCTCTTCACACTCTCTCCTCTTCCCGTTTCCGCCACCGACCACATCGTCGGTGCTAACCGTGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCCAACAACCACACTTTCTATGTCGGCGACTTCATCTCATTTAGGTATCAGAAGAATCAGTACAATGTGTTTGAAGTGAACCAAACTGGTTACGACAACTGCACCCTAGACAGTGCTGTTGGAAATTGGTCCAGCGGGAAAGATTTCATATTACTGAATAAAACTATCAGATATTACTTCATTTGTGGTAATGGCCAATGCTTAAATGGAATGAAAGTCTCAGTTCTTGTTCATCCACTTCCTCCTCCTCCTACTTCATCTCAACACAATCATTCAACCTCAAAATCTGATGCTCCTATGGTTTTGGAAAGTTTGGGACTTAGGTCTATGATGCTGTCTTTTGTTGTTTTTATTATGTTTGGATTTGTTTTGGTATAA 531 0.4218 MAASSSSSFFILLTFFFLLLLFTLSPLPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQKNQYNVFEVNQTGYDNCTLDSAVGNWSSGKDFILLNKTIRYYFICGNGQCLNGMKVSVLVHPLPPPPTSSQHNHSTSKSDAPMVLESLGLRSMMLSFVVFIMFGFVLV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00127 176 Pfam Plastocyanin-like domain 42 122 IPR003245 GO:0009055
Vivi5g00127 176 PANTHER BLUE COPPER PROTEIN 31 140 IPR039391 GO:0009055
Vivi5g00127 176 FunFam Lamin-like protein 30 131 - -
Vivi5g00127 176 ProSiteProfiles Phytocyanin domain profile. 32 130 IPR003245 GO:0009055
Vivi5g00127 176 Gene3D - 30 131 IPR008972 -
Vivi5g00127 176 SUPERFAMILY Cupredoxins 31 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00127 Vivi-Chr5 1526472 1527249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00127 7 138 Phytocyanin Superfamily AT5G15350 44.444 2.55e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00127 - - adu:107463738 229.565