Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00082 ATGAAGATGAAGTGCAACAAAGCTTGTGAACTTTGCAATCAACACGCTTCTTTCTATTGTCCTTCCGATTCAGCTTTTCTCTGCCGGAACTGCGACCACGCCGTTCACGGTGTTAACTTCCTCGTCGCTCGCCATCGCCGTCATATCCTCTGCTCCAAATGCGAAAGTTTCACCGGAATTCACATCACCGGCACCGAACTCCGTCGCTTTCCATCAACTTGCCGCTCTTGCTCACCGGAAAATCATTCCGATGACACCGATTCTCAATGTTCTTCTTCAGAGTCTTGCGTTACGGCACCAAAGAAGACCAAAGCTCGAAGGATGAAGACTTGTAAGACTCTGAGTTCTGTTATCGATGATGCCTCTCCGATCGGATCGGTGGCGGAGGAGCTTTTTGAGAAATGGAGCAGAGAGTTAGGGTTAGGATTTAAGGTAACGGTGGAGGGTTTGAGAAGGTGGAAGTTAGTGCCGTTGAAAGTTGGTGCTGCGGCGTCGTTTTGGTTGGGGCTAAGATTGTGTAGGGACGGTTGTTTAGCCACGTTTCAGAATCTGATTAGGTTGGAGAAAATATCAGGGGTGCCAGCTAAGCTTATTTTGGCCGCGAATGTTAAACTGACACGTGTCTGTATGCAGCTTCAAGTTGAAAGGGAAGAAGGATCTGATGAGTGCTGA 672 0.4821 MKMKCNKACELCNQHASFYCPSDSAFLCRNCDHAVHGVNFLVARHRRHILCSKCESFTGIHITGTELRRFPSTCRSCSPENHSDDTDSQCSSSESCVTAPKKTKARRMKTCKTLSSVIDDASPIGSVAEELFEKWSRELGLGFKVTVEGLRRWKLVPLKVGAAASFWLGLRLCRDGCLATFQNLIRLEKISGVPAKLILAANVKLTRVCMQLQVEREEGSDEC 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00082 223 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 95 - -
Vivi5g00082 223 SMART bboxneu5 4 50 IPR000315 GO:0008270
Vivi5g00082 223 CDD Bbox1_BBX-like 8 48 - -
Vivi5g00082 223 ProSiteProfiles Zinc finger B-box type profile. 4 50 IPR000315 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00082 9 222 C2C2-CO-like Transcription Factor Family AT3G21150 30.837 2.94e-23 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00082 - - vvo:131606085 464.151