Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00069 ATGACTACCTCCTCCAACGGCCATCTCACCGTCAACATCGCCGCCGGTCACCACGACAACGACGACAACAACAATGCTCCACCACCTTCCGATAACAACCATCACCACAACAACAACCAGCATGATAATGACGATGACGACGACGACGAACTCATCGATCCTGATGATCCTTTCGATATTACTCAAACGAAGAATGCTTCGCACGAGACTCTTCGCCGTTGGAGACAAGCAGCACTGGTGCTCAATGCTTCCAGGCGTTTTAGATATACGCTGGACTTGAAAGGGGAAGAAGAAAAACAGCAAAAGAAGAGCTTAATTAGAGCCCATGCACAAGTCATAAGAGCTGCACTGCTTTTTAGATTGGCTGGTGAACGCGAACTAGTGATAAGTCCAGCGACTACACCCCCACGTCAAACTTCAGTTGGTGACTATGGAGTTGGGCTAGAAGAACTTGCTTCGATGTCTAAAGATCAGAATATTTCTGCTTTACAGCAATTAGGAGGGGTTAAAGGCCTATCAAATTTACTAAAGTCAAATCCAGATAAAGGAATTAGTGGAGATGATGATGATCTATTGAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGAAAAAAAGGGAGAAGTTTTTGGAGGTTTTTATGGGAAGCTTGGCAAGATCTTACTCTCATAATATTGATTATAGCAGCTGCAGTGTCATTGGTACTTGGAATAAAAACAGAGGGTTTGGAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTTTACTTGTTATTGTAGTAACAGCTGTCAGTGATTATCGACAATCTCTGCAATTTCAGAATTTGAATGCAGAGAAACAAAATATACAATTAGAGATCATTAGAAGTGGAAGAACAATCAAAATATCAATATTTGAGATTGTTGTTGGTGACGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCCGACGGAGTATTAATCGTAGGTCACTCACTTGCAATTGATGAATCCAGTATGACTGGTGAAAGCAAAATTGTTCATAAGGATCACAAAGCACCTTTTTTTATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGCGTTATGCTGGTAACTGGTGTTGGTATTAATACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGACACCGGAGAAGAGACTCCGTTACAGGTACGTTTAAATGGAGTGGCAACTTTTATCGGTATAGTTGGGCTTAGTGTAGCTGTTTTAGTGCTCGCAGTCCTCTTGGGCAGATACTTTTCTGGCCACACAAATGATTTAAATGGAAATCCCGAATTTGTTGCTGGAAGGACCGGTATTAGTGATGCAGTTGATGATGTCATCAAAATTTTTACCATTGCAGTCACAATCGTAGTTGTTGCAGTGCCTGAAGGTCTACCTTTGGCTGTTACTTTAACGTTGGCATATTCAATGCGGAAAATGATGGCAGATAAAGCCTTGGTACGAAGACTGTCAGCCTGCGAAACTATGGGCTCTGCTACAACAATATGCAGTGATAAGACAGGAACATTAACCTTAAATCAGATGACTGTTGTTGAGGCATATGTTGGGAGAAACAGTCTAAATCCAGCAGATGACTCTTCGAAGTTTCATCCAGAAGCATTATCCCTGATAAAAGAAAGCATTGCACAGAATTCCACTGGAAATGTTTTTGTGTCTAAGGATGGTGGAGAGGTAGAGGTTTCAGGATCACCAACAGAGAAGGCGATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATGTTATCAGATCTAATTCGACAGTTCTTCACGTCTTTCCATTCAATTCCGAGAAAAAACGAGGTGGTGTTGCTCTGAAGCTGGCGGACTCTGGAGTGCATATACACTGGAAAGGAGCTGCAGAAATAGTTCTAGGAGCATGTGACCAATATCTTGATTCAAATGGTCATTTGCAATCCATCGAAGAACAGAAGGCTTTTTTCAAGGAGGCTATTGATGACATGGCTGCTCGCAGCTTGCGTTGTGTTGCCATTGCATACAGATCATATGAATTAGACCAAATTCCATCTAATGAGGAGGATTTGAATCAATGGTCCTTACCCGAAAATGAGCTTGTTTTGCTTGCTATTGTTGGAATCAAGGATCCTTGTCGCCCTGGTGTCAAAGATGCTGTGAGAGTATGTACTGAAGCCGGTGTTAAGGTACGCATGGTTACCGGAGACAACCTTCAAACAGCAAAGGCAATAGCTCTAGAGTGTGGGATACTGGCTTCAATTGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAGGTATTTCGGGAGCTATCTGAACAAGAGAGGGAACAGATTGCCAAGAAAATCACGGTAATGGGAAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCACTACGTAAAGGAGGTGAAGTAGTTGCTGTCACAGGAGATGGCACTAATGATGCCCCTGCACTTCACGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCTTGGATGATAACTTTGCATCAGTTGTAAAGGTTGTTCGCTGGGGCCGTTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAGCTAACTGTCAATGTCGCTGCTCTTGTGATTAATGTCGTGGCAGCAATAAGTTCTGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCCCTTGCACTGGCTACTGAACCACCAACAGATCACCTAATGCACAGATCACCAGTTGGTCGAAGGGAACCTCTTATAACAAATATTATGTGGAGAAACTTGCTCGTGCAGGCTCTTTATCAAATCACAGTTCTTCTCGTTCTGAACTTCGGTGGTGAAAGTATTCTACCTAAGCAAGATACTAAAGCCCATGGCTTTCAAGTGAAGAATACTATGATATTCAATGCATTTGTCATGTGCCAAGTATTCAATGAGTTCAATGCTCGGAAACCAGATGAAATGAATGTCTTCCGAGGAGTGACCAAGAACCGCCTCTTCATGGGAATTATTGGAATAACCATTATACTTCAGATAATCATCATCGAGTTCCTTGGAAAGTTCGCCTCAACAGTGAGGCTTAATTGGTCGCTGTGGCTTGCTTCTATTTTAATCGGTCTTGTCAGTTGGCCTCTTGCTATAGCTGGAAAACTCATTCCAGTTCCCAAAACACCATTGTCGCGTACCTTCATCAAGCCATTCAGGCGATTGAGGAGGTCTCGTCCAGCGCAATAG 3309 0.4243 MTTSSNGHLTVNIAAGHHDNDDNNNAPPPSDNNHHHNNNQHDNDDDDDDELIDPDDPFDITQTKNASHETLRRWRQAALVLNASRRFRYTLDLKGEEEKQQKKSLIRAHAQVIRAALLFRLAGERELVISPATTPPRQTSVGDYGVGLEELASMSKDQNISALQQLGGVKGLSNLLKSNPDKGISGDDDDLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLVLGIKTEGLEEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEIIRSGRTIKISIFEIVVGDVIPLKIGDQVPADGVLIVGHSLAIDESSMTGESKIVHKDHKAPFFMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVLVLAVLLGRYFSGHTNDLNGNPEFVAGRTGISDAVDDVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGRNSLNPADDSSKFHPEALSLIKESIAQNSTGNVFVSKDGGEVEVSGSPTEKAILSWAVKLGMNFDVIRSNSTVLHVFPFNSEKKRGGVALKLADSGVHIHWKGAAEIVLGACDQYLDSNGHLQSIEEQKAFFKEAIDDMAARSLRCVAIAYRSYELDQIPSNEEDLNQWSLPENELVLLAIVGIKDPCRPGVKDAVRVCTEAGVKVRMVTGDNLQTAKAIALECGILASIEDAVEPNIIEGKVFRELSEQEREQIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLLVQALYQITVLLVLNFGGESILPKQDTKAHGFQVKNTMIFNAFVMCQVFNEFNARKPDEMNVFRGVTKNRLFMGIIGITIILQIIIIEFLGKFASTVRLNWSLWLASILIGLVSWPLAIAGKLIPVPKTPLSRTFIKPFRRLRRSRPAQ 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00069 1102 FunFam Calcium-transporting ATPase 833 1081 - -
Vivi5g00069 1102 Gene3D - 506 861 IPR023214 -
Vivi5g00069 1102 Gene3D - 519 716 IPR023299 GO:0000166
Vivi5g00069 1102 FunFam Calcium-transporting ATPase 709 861 - -
Vivi5g00069 1102 FunFam Calcium-transporting ATPase 519 716 - -
Vivi5g00069 1102 MobiDBLite consensus disorder prediction 1 34 - -
Vivi5g00069 1102 SFLD p-type atpase 491 868 IPR044492 -
Vivi5g00069 1102 SUPERFAMILY Calcium ATPase, transduction domain A 287 382 IPR008250 -
Vivi5g00069 1102 NCBIfam HAD-IC family P-type ATPase 448 535 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi5g00069 1102 NCBIfam HAD-IC family P-type ATPase 782 896 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi5g00069 1102 FunFam Calcium-transporting ATPase 9 plasma membrane-type 363 533 - -
Vivi5g00069 1102 PANTHER CATION TRANSPORTING ATPASE 130 1079 - -
Vivi5g00069 1102 Pfam Cation transporter/ATPase, N-terminus 167 234 IPR004014 -
Vivi5g00069 1102 MobiDBLite consensus disorder prediction 1 68 - -
Vivi5g00069 1102 PRINTS P-type cation-transporting ATPase superfamily signature 333 347 - -
Vivi5g00069 1102 PRINTS P-type cation-transporting ATPase superfamily signature 816 835 - -
Vivi5g00069 1102 PRINTS P-type cation-transporting ATPase superfamily signature 731 741 - -
Vivi5g00069 1102 PRINTS P-type cation-transporting ATPase superfamily signature 509 523 - -
Vivi5g00069 1102 PRINTS P-type cation-transporting ATPase superfamily signature 840 852 - -
Vivi5g00069 1102 PRINTS P-type cation-transporting ATPase superfamily signature 709 720 - -
Vivi5g00069 1102 Coils Coil 651 671 - -
Vivi5g00069 1102 FunFam Calcium-transporting ATPase 217 274 - -
Vivi5g00069 1102 SFLD C1.7: P-type atpase like 491 868 - -
Vivi5g00069 1102 Gene3D - 217 1067 - -
Vivi5g00069 1102 Pfam E1-E2 ATPase 287 487 - -
Vivi5g00069 1102 SMART Cation_ATPase_N_a_2 168 239 IPR004014 -
Vivi5g00069 1102 Pfam Ca2+-ATPase N terminal autoinhibitory domain 55 97 IPR024750 GO:0005516
Vivi5g00069 1102 Gene3D - 189 385 - -
Vivi5g00069 1102 ProSitePatterns E1-E2 ATPases phosphorylation site. 511 517 IPR018303 -
Vivi5g00069 1102 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1079 IPR023298 -
Vivi5g00069 1102 Pfam Cation transporting ATPase, C-terminus 901 1076 IPR006068 -
Vivi5g00069 1102 SUPERFAMILY HAD-like 507 921 IPR036412 -
Vivi5g00069 1102 FunFam Calcium-transporting ATPase 265 385 - -
Vivi5g00069 1102 PRINTS Sodium/potassium-transporting ATPase signature 502 523 - -
Vivi5g00069 1102 PRINTS Sodium/potassium-transporting ATPase signature 252 272 - -
Vivi5g00069 1102 PRINTS Sodium/potassium-transporting ATPase signature 628 646 - -
Vivi5g00069 1102 CDD P-type_ATPase_Ca_PMCA-like 191 949 - -
Vivi5g00069 1102 FunFam Calcium-transporting ATPase 66 122 - -
Vivi5g00069 1102 Gene3D - 66 120 - -
Vivi5g00069 1102 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 516 713 IPR023299 GO:0000166
Vivi5g00069 1102 Pfam haloacid dehalogenase-like hydrolase 506 830 - -
Vivi5g00069 1102 NCBIfam calcium-translocating P-type ATPase, PMCA-type 157 1079 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00069 Vivi-Chr5 850407 866815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00069 1 1101 Primary Pumps ATPases AT3G21180 76.044 0.0 1676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00069 K01537 - gmx:100777845 1797.71