Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00060 ATGGTTAGATTAACAAGAAACCAACAAAAACATCATATATTGAAATCTAATCATTTCTCAATACAATCTCAAATCCAAACTAGTAATCATTTTCAGAAACAAACACTTCATTTTCCAATCTTAAATATGGAAAACAAAGAAAACATCGAAGCTGCCAGAAAGTTCTTAACTTCTAGCTTACAAACATCGAAAGCTATTTCTTCTGCATTAGATGAGTCTAGTTCAAGATTGGAGCTTCTTAACAGAAGATTTGTATCCATGCAAGTTTCCCTTAAACCAATCTCAATTCAAAATCTACCATTTTCTGATGTTGAACATGGTATAGACAGTGTTCTATGTTCTGTTTCAGCGGTCCACAAGGTGTTAGAATGTGTTACTCAGTTAAAACATTCTCTTTCAGCAGATCCGAGTTCCGATTTATTCACATATGTTTCAAACACAAAGAAGCTTGAAGAAGCATTGAAGCTTCTCACTGATAATTGTAACTTAGCATCAGGTTGGTTGAAGAGTGTTTTTGAGTTGTTACAAAACAAAACAACAATTAGTATCAATGATTCTTACCTATTGAATGTTAACAAATCATTGAGAATATTGCAACAATTGCAGACCGAAGAGAACCGTGCGCACTTCGATGGAGGAAGCCTTAGCACTGCCCTTGACAGACTAGAGATTGCTTTTCACAAACTTCTAATGGCAAACTCTATGCCTCTTCCTTTGGTTTCATTAACATCACACATTGATCAGCAAAACAATGACGCGAATCAAGGTTTGGAATTTCCATGTTCTTTAAAGAAGAAGTTACAACTCATCGCGGAGAGATTAAATGCAAATAATAGGTTAGACAAGTGTCATGCTATGTATGTTGAAGTTCGAGGAACGAATGCTCGAAGAAGTTTGAAGACTCTAGATTTGAGCTACCTTGAGATTTCAACGACCGAGTTTGAGGCTGCGTGTGGAAAGGAGAGTTGCATAGACAAATGGGGAAAGGATTTGAAGTTAGTTGTTAACAAACTTCTTGAGGCTGAATACAAGCTATGTACTATTGTATTCGAGAAAATCGGCTCTAAAGCATGGATGAGCTGTTTTGCAAAAATTGCTATTGAATCAGGAATACTTTCATTCATCAAATTTGGAAAGATTGTTACGGATAGAAAAAACGACCCTTTTAAGCTGCTGAATCTGTTGTCAATGTTCAAAGTCTTGAATGGTTTAAGACTAAAATTTAATCAACTTTTTAGAGGAGAAGCTTGCGAAGAAATTAGAATTGTGACAAAAGACCTTATCACAAGAGTTGTGAATGGTGTAATTGAAATATTTTGGCAACTTCCTGCACAAGTAAAGTTGCAACGACCGACGTGTCCTCCTGCGGACGGAAGTGTTCCTAAGTTGGTAAGTTTTGTTACTGATTATTGTGATAAGCTTCTTAGTGATGAGTATAAGCCAGATTTGAATAAGGTATTGGAAATATATTTTAGTTGGAAAAATGAACTATATGAAGAGGGTATAGTTTTGAATCAAATCTATAGTATAATTAAGGAAGTTGCAGTTAATTTAGATGATTGGTCAAAAGTGTATGAAGATGTGAATTTGTCATATTTTTTTATGATGAATAATCATTGTCATTTCTATAACTTAAGAGGCACTTTAGTTGGAAATATGATGGGAGATTCTTGGTTAAGTGCACATGAACAATACAAAGAGTACTATGCAGCACTTTACTTGAGGAATAGTTGGGGAAATCTTCAAAATATTCTTGTAATTTCATCCTCTATGAGTTATCAAGATTTGGTTAAGAGAATAAGTGCTTTTAGTCAAGCTTTTGATGAAAGGTACAAGAAGCAATGTAATTGGATAATCCATGATGAGGTGTTGAGGACACACATGTGCAAACATTTGGTGGAAGGTGTTATACCAATCTATAAGGTTTATTTGAAGAACTACATTTTGTCAATTGAAAGTGATGATGTTGTGGTTGACAAGAAACATGTTAAATATACAGTGCAAAGTTTGGAGAATAGGATTTGGTCACTATTTCAACCAAAAGTGAAGAAGAATGATAACATTAAACACAAAGATTTGATTAGTCAAATTAGACAAGTTAGCCATAAGTTAGGTTTGACTTAA 2124 0.3427 MVRLTRNQQKHHILKSNHFSIQSQIQTSNHFQKQTLHFPILNMENKENIEAARKFLTSSLQTSKAISSALDESSSRLELLNRRFVSMQVSLKPISIQNLPFSDVEHGIDSVLCSVSAVHKVLECVTQLKHSLSADPSSDLFTYVSNTKKLEEALKLLTDNCNLASGWLKSVFELLQNKTTISINDSYLLNVNKSLRILQQLQTEENRAHFDGGSLSTALDRLEIAFHKLLMANSMPLPLVSLTSHIDQQNNDANQGLEFPCSLKKKLQLIAERLNANNRLDKCHAMYVEVRGTNARRSLKTLDLSYLEISTTEFEAACGKESCIDKWGKDLKLVVNKLLEAEYKLCTIVFEKIGSKAWMSCFAKIAIESGILSFIKFGKIVTDRKNDPFKLLNLLSMFKVLNGLRLKFNQLFRGEACEEIRIVTKDLITRVVNGVIEIFWQLPAQVKLQRPTCPPADGSVPKLVSFVTDYCDKLLSDEYKPDLNKVLEIYFSWKNELYEEGIVLNQIYSIIKEVAVNLDDWSKVYEDVNLSYFFMMNNHCHFYNLRGTLVGNMMGDSWLSAHEQYKEYYAALYLRNSWGNLQNILVISSSMSYQDLVKRISAFSQAFDERYKKQCNWIIHDEVLRTHMCKHLVEGVIPIYKVYLKNYILSIESDDVVVDKKHVKYTVQSLENRIWSLFQPKVKKNDNIKHKDLISQIRQVSHKLGLT 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00060 707 Pfam Exo70 exocyst complex subunit 326 674 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi5g00060 707 Gene3D Exocyst complex component Exo70 176 687 - -
Vivi5g00060 707 PANTHER EXOCYST COMPLEX PROTEIN EXO70 184 678 IPR004140 GO:0000145|GO:0006887
Vivi5g00060 707 SUPERFAMILY Cullin repeat-like 118 678 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00060 Vivi-Chr5 601816 604691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00060 51 689 EXO70 exocyst subunit family AT4G31540 44.817 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00060 K07195 - gmx:121175138 894.419