Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi59g00012 ATGACAAAAATTTCCATCGAACCCTCTTCCAAGCTTAAGGAAAAGGGAAAACATTGTTATACCATCTCCAACACACCATTTGAGATTGACATGAAATATGTTCCTATTAAGGCAATTGGAAGAGGAACATATGGTGTGGTGTGTTCATCCATCAACAAGGATACCAATGAAAAAGTTGCAATTAAGAAGATTAACAACATATTTGATAATTCGGGCGATGCAATCAGAACTTTAAGGGAGTTGAAACTACTTAGACATATTTGTCACGAGAATGTCATATCATTAAAAGATGTTATGATGCCTCCACCGAAAGAAAGAAAAAGTTTCAAAGATGTGTATTTGGTGTATGAGCTCATGGATACAGATCTTCATCGAGTTATCCAGTCATCTCATCCACTTTCTAATGATCATTGCAAATATTTCTTATTTCAGCTACTTCGAGGTCTTAAATATCTCCACTCTGCAAATGTTCTTCACCGAGACTTGAAACCTGGTAATTTGCTCATCAGTAGGAATTGTGATTTGAAGATATGCGACTTTGGGCTTTCCCGAACCAATGGTGTTGATGGAGAATTTATGACCGAATATGTTGTCACACGTTGGTATCGTGCTCCTGAGCTTCTATTGGGTTTGTTTAATTATGGAACCTCGATAGATGTGTGGTCGGTAGGATGCATTTTTGCCGAGATTCTTGGAAGAAAACCAATTTTTCCTGGGTCTAATTCCCTTGATCAACTTGAATTAATTGTTAGTGTTCTTGGGAGCCCGCATGAAGAGGATATTGAGTTTATTGAAAATCCAAAACCTAGAAGTTTTATCAAATCACTTCCCTTAACAAAGGGAATACGCTTCTCTTGGCTATTCCCACACGCAGATCCATTAGCCATAGATTTGTTGGAAAAAATGCTTGTGTTTGATCCAACCAAAAGAATTACTATTATAGAAGCACTGCAACATCCATATATGGTTGGTCTATATGATCCAAGGTATAATCCTCCTGCTCGAGCCCCTATCAATCTTGACATAAATAAAAATTGGGGGGAAGAGATGATTAGAGAAATGATGTTGACTGAGATGCTACATTACCATCCAGAAGCTGCTTTTGCCAATACATAG 1116 0.3763 MTKISIEPSSKLKEKGKHCYTISNTPFEIDMKYVPIKAIGRGTYGVVCSSINKDTNEKVAIKKINNIFDNSGDAIRTLRELKLLRHICHENVISLKDVMMPPPKERKSFKDVYLVYELMDTDLHRVIQSSHPLSNDHCKYFLFQLLRGLKYLHSANVLHRDLKPGNLLISRNCDLKICDFGLSRTNGVDGEFMTEYVVTRWYRAPELLLGLFNYGTSIDVWSVGCIFAEILGRKPIFPGSNSLDQLELIVSVLGSPHEEDIEFIENPKPRSFIKSLPLTKGIRFSWLFPHADPLAIDLLEKMLVFDPTKRITIIEALQHPYMVGLYDPRYNPPARAPINLDINKNWGEEMIREMMLTEMLHYHPEAAFANT 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi59g00012 371 ProSiteProfiles Protein kinase domain profile. 33 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi59g00012 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Vivi59g00012 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 32 323 - -
Vivi59g00012 371 Gene3D Transferase(Phosphotransferase) domain 1 119 348 - -
Vivi59g00012 371 FunFam Mitogen-activated protein kinase 19 128 - -
Vivi59g00012 371 SMART serkin_6 33 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi59g00012 371 Pfam Protein kinase domain 34 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi59g00012 371 SUPERFAMILY Protein kinase-like (PK-like) 29 329 IPR011009 -
Vivi59g00012 371 Gene3D Phosphorylase Kinase; domain 1 20 355 - -
Vivi59g00012 371 ProSitePatterns MAP kinase signature. 68 173 IPR003527 GO:0004707|GO:0005524|GO:0006468
Vivi59g00012 371 ProSitePatterns Protein kinases ATP-binding region signature. 39 63 IPR017441 GO:0005524
Vivi59g00012 371 FunFam Mitogen-activated protein kinase 119 348 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi59g00012 6 371 MAP Kinase Gene Family AT2G18170 71.038 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vivi59g00012 Pkinase 2.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi59g00012 K20537 - gmx:100788131 590.497