LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi59g00010	ATGGCAACTTTAATTCAACCTCCTTATAGAATTAAACCAAAAGGAAAGCATTATTATGCCATTGGAAAATTAGAAAAAATATTGTTTGAGATTGATATGAAGTATGTTCCAATCAAACTCATAGGCAGAGGAGGATATGGTGTGGTATGTTCATCCATTAATAAGGACACCAATGAGAAAGTTGCAATTAAGAAAATTTGCAATGTATTTGATAATTGTGGTGATTCAATTGGAACTTTAAGAGAGATGAAGATACTTAGATATATTCAACATGAAAATGTGATCACCTTAAAAGATATTATGATGCCACCCACATTTCAAAGAACAAGTTTTAAAGATGTCTATTTAGTTTATGAACTAATGGATACTGATCTTCATCAAATTATCAAGTCATCTCAAATACTTTCTAATGATCATTGCAAATATTTTTTATTTCAGCTACTTCAAGGTCTTAATTATCTTCACTCTGCAAATATTCTTCATCGAGACTTGAAACCCAAAAATCTACTTGTCAATAAAAATTTTGATTTGAAGATATGTGACTTTGGATTTGCTCGGACCAATGGAGTTGGTGATGAGTCAATGACAGATTATGTGGTCACACGATGGTATCGTGCTCCAGAGCTTTTACTAAGCAGTAACAATTATGGAGCCTCAATTGATATGTGGTCTGTAGGATGTATTTTTGCTGAAATTCTTGGTAGAAAGCCAATTTTTCAAGGAACCGACATCTTAAACCAACTTAAACTAATTGTAAGCATTCTTGGGAGTCCAAGTGAATATGATCTCGAGTTTATTGAAAATCCAAAAGCTATGATTTTTATCAAATCACTTCCATTTACAAAGGGAACACACTTCTCTCAGCTATTCCCACAAGCAGATTCGTTAGCCATAGATTTGTTGCAAAATATGCTCACGTTTGATCCAACAAAAAGAATAACTGTATCAGAAGCACTCCAACATCCATATATGGCTGGTCTTTATGATCCAAGGTGTAACCTTCCTGCTCGAGCTCCTATCAATCTTGACATAAATGAAAATTGGGACGAGGATAGGATTAGAGAAATGATGTGGAATGAGATGCTACATTATCATCCAGAAGCTGCTTTAGCTAATGTTTAG	1122	0.3387	MATLIQPPYRIKPKGKHYYAIGKLEKILFEIDMKYVPIKLIGRGGYGVVCSSINKDTNEKVAIKKICNVFDNCGDSIGTLREMKILRYIQHENVITLKDIMMPPTFQRTSFKDVYLVYELMDTDLHQIIKSSQILSNDHCKYFLFQLLQGLNYLHSANILHRDLKPKNLLVNKNFDLKICDFGFARTNGVGDESMTDYVVTRWYRAPELLLSSNNYGASIDMWSVGCIFAEILGRKPIFQGTDILNQLKLIVSILGSPSEYDLEFIENPKAMIFIKSLPFTKGTHFSQLFPQADSLAIDLLQNMLTFDPTKRITVSEALQHPYMAGLYDPRCNLPARAPINLDINENWDEDRIREMMWNEMLHYHPEAALANV	373

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi59g00010	373	Pfam	Protein kinase domain	36	324	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi59g00010	373	FunFam	Mitogen-activated protein kinase	20	131	-	-
	Vivi59g00010	373	SUPERFAMILY	Protein kinase-like (PK-like)	33	330	IPR011009	-
	Vivi59g00010	373	FunFam	Mitogen-activated protein kinase	121	350	-	-
	Vivi59g00010	373	Gene3D	Transferase(Phosphotransferase) domain 1	121	350	-	-
	Vivi59g00010	373	ProSitePatterns	Protein kinases ATP-binding region signature.	41	65	IPR017441	GO:0005524
	Vivi59g00010	373	ProSiteProfiles	Protein kinase domain profile.	35	324	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi59g00010	373	SMART	serkin_6	35	324	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi59g00010	373	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	159	171	IPR008271	GO:0004672\|GO:0006468
	Vivi59g00010	373	Gene3D	Phosphorylase Kinase; domain 1	23	360	-	-
	Vivi59g00010	373	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	35	337	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi59g00010	1	373	MAP Kinase Gene Family	AT2G18170	71.046	0.0	551

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Vivi59g00010		Pkinase	1.3e-72	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi59g00010	K20537		-	gmx:100783422	581.252