Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi59g00004 ATGCCGCCGATTGCTGCCGCAGCTCCGGCCATCTTTTCATCGTCATTCATTCTTTCTTCTTTTTCGCCGTCGACATTTCCTTTCCATCTGCACTTTACACCACTAGGGAAAATGGAAGAAGAAGAAGATGAAACCTTATATATTGGTGATGAAATTTATGAGAATCATTCCAAGCGTGCTTTCGAGGGTGAAGAAGACAATGATTTTCCTTCCCGAACTGCTTCTCTTAACGCTGATGAACTCGACATCTCGAAACTTGATTTGCCTTCACAAATTGTTGATTCGCTCCGTGAGAGGGGGATTACGCAACTTTTTCCTATTCAGAGAGCGGTGTTAGTGCCTGCACTTCAAGGTAGAGATATCATTGCTCGTGCAAAGACTGGAACGGGGAAGACACTGGCTTTTGGAATTCCTATTATCAATAGCCTCGATAATGGCGAGGATTCAGATAGTTACAGTAGCAGGCGACTTCCTAGAGCTTTGGTACTTGCACCTAACAGGGAGTTAGCAAAGCAAGTGGAGAAGGAGATAAAAGAATCTGAACCTTATCTCAAAACGGTTTGTATTTATGGAGGTGTTTCTTATACTTCTCAGCAGGGTGCACTTTCACGTGGGGTTGATGTAGTTGTTGGAACGCCCGGTAGACTGATTGATCTCATCAACGGGAACACACTTAACTTGAGCGAAGTTGAGTATTTGGTGCTTGATGAAGCTGATCAAATGCTTGCTGTTGGGTTTGAGGAGGCTGTGGAAGTCATTTTGGAAAAGCTTCCAGCTAAGAGACAGAGCATGCTTTTTTCTGCAACCATGCCTAGTTGGGTGAAGAAATTGGCCTGA 837 0.4421 MPPIAAAAPAIFSSSFILSSFSPSTFPFHLHFTPLGKMEEEEDETLYIGDEIYENHSKRAFEGEEDNDFPSRTASLNADELDISKLDLPSQIVDSLRERGITQLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIINSLDNGEDSDSYSSRRLPRALVLAPNRELAKQVEKEIKESEPYLKTVCIYGGVSYTSQQGALSRGVDVVVGTPGRLIDLINGNTLNLSEVEYLVLDEADQMLAVGFEEAVEVILEKLPAKRQSMLFSATMPSWVKKLA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi59g00004 278 SMART ultradead3 100 277 IPR014001 -
Vivi59g00004 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 278 IPR027417 -
Vivi59g00004 278 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 68 278 - -
Vivi59g00004 278 CDD DEADc 92 278 - -
Vivi59g00004 278 Pfam DEAD/DEAH box helicase 105 277 IPR011545 GO:0003676|GO:0005524
Vivi59g00004 278 Gene3D - 82 278 IPR027417 -
Vivi59g00004 278 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 112 278 IPR014001 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi59g00004 62 271 Eukaryotic Initiation Factors Gene Family AT1G72730 37.850 4.58e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi59g00004 - - vvo:131623149 503.442