Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi59g00003 ATGCCGCCGATTGCTGCCGCAGCTCCGGCCATCTTTTCATCGTCATTCATTCTTTCTTCTTTTTCGCCGTCGACATTTCCTTTCCATCTGCACTTTACACCACTAGGGAAAATGGAAGAAGAAGAAGATGAAACCTTATATATTGGTGATGAAATTTATGAGCGTGCTTTCGAGGGTGAAGAAGACAATGATTTTCCTTCCCGAACTGCTTCTCTTAACGCTGATGAACTCGACATCTCGAAACTTGATTTGCCTTCACAAATTGTTGATTCGCTCCGTGAGAGGGGGATTACGCAACTTTTTCCTATTCAGAGAGCGGTGTTAGTGCCTGCACTTCAAGGTAGAGATATCATTGCTCGTGCAAAGACTGGAACGGGGAAGACACTGGCTTTTGGAATTCCTATTATCAATAGCCTCGATAATGGCGAGGATTCAGATAGTTACAGTAGCAGGCGACTTCCTAGAGCTTTGGTACTTGCACCTAACAGGGAGTTAGCAAAGCAAGTGGAGAAGGAGATAAAAGAATCTGAACCTTATCTCAAAACGGTTTGTATTTATGGAGGTGTTTCTTATACTTCTCAGCAGGGTGCACTTTCACGTGGGGTTGATGTAGTTGTTGGAACGCCCGGTAGACTGATTGATCTCATCAACGGGAACACACTTAACTTGAGCGAAGTTGAGTATTTGGTGCTTGATGAAGCTGATCAAATGCTTGCTGTTGGGTTTGAGGAGGCTGTGGAAGTCATTTTGGAAAAGCTTCCAGCTAAGAGACAGAGCATGCTTTTTTCTGCAACCATGCCTAGTTGGGTGAAGAAATTGGCCTGA 825 0.4436 MPPIAAAAPAIFSSSFILSSFSPSTFPFHLHFTPLGKMEEEEDETLYIGDEIYERAFEGEEDNDFPSRTASLNADELDISKLDLPSQIVDSLRERGITQLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIINSLDNGEDSDSYSSRRLPRALVLAPNRELAKQVEKEIKESEPYLKTVCIYGGVSYTSQQGALSRGVDVVVGTPGRLIDLINGNTLNLSEVEYLVLDEADQMLAVGFEEAVEVILEKLPAKRQSMLFSATMPSWVKKLA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi59g00003 274 Gene3D - 78 274 IPR027417 -
Vivi59g00003 274 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 70 274 - -
Vivi59g00003 274 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 108 274 IPR014001 -
Vivi59g00003 274 Pfam DEAD/DEAH box helicase 101 273 IPR011545 GO:0003676|GO:0005524
Vivi59g00003 274 CDD DEADc 88 274 - -
Vivi59g00003 274 SMART ultradead3 96 273 IPR014001 -
Vivi59g00003 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 274 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi59g00003 58 267 Eukaryotic Initiation Factors Gene Family AT1G72730 37.850 5.44e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi59g00003 - - vvo:131623149 488.804