Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi599g00004 ATGGGCAGTAGGGGAAGAATTGCTGAGGATACTAACAAAATTGCCAACGGGATGCCGAGTTACGCGCCTCCATTGCCGCCGCCTAATTCCATGGGCATGGAAGGAACTAATATTCATCCTTCTCGAATTTCTGATTTTGGAGCCCTGGAACAGTCTCTAGGATTTCGTGTTGAGGATGCCATGAATCTTAGCAGAAATCCAGTGTTTAATCAAATGAAAGCAAATAGCCAAGCTTTAGGTGCTGATATTCAATTTGGTGCTCTAAGTAAGTCAATTGCAAACTCGGATATAAACCATTCTACTGCCATTGCTGGATCTCAGACATTGCAACAACAGAAAGACTCACAGCCGAATTTGGCTTCAACATCTGGCGGCCATCGCGAGAATTGGGGAGAGTCCAACATGGGTGATGGAAGCCCTGATACTTCAACAGATGATACAGAAGACAAGAATCAAATGGCTGAAAGAGGAGAATCAAGTGAAAGATCAAAAGATAAATCAGATCAAAAGACGTTAAGACGGTTAGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGACTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGCAGTAGGCTGAAACTGACCCAACTTGAGCAAGAGCTACAGCGAGCACGCCAGCAGGGGATTTTTATTTCAAGCACTGGAGAGCAGACTCATTCAATGAGCGGAAATGGCGCGATGGCATTTGATGCAGAATATGCACGATGGTTAGAAGAGCATAATAGGCAAACCAATGAACTAAGGGCTGCGATAAATTCTCATGCGGGGGACATTGAACTCCGTACCATTGTGGAAAATTTCATGACTCAATTTGAAGATATCTACAGGCTGAAAGGTGTTGCAGCAAAAGCCGATGTTTTCCACATTCTATCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGGTCATCCGAAATTCTTAAGCTTCTTGTAAGTCATTTGGAGCCTTTAACCGAGCAACAATTAATGGGCATCTACAACTTGCAACAGTCATCCCAACAGGCCGAAGATGCTCTCTCCCAAGGAATGGATGCTTTGCAGCAATCACTTTCTGAGACACTGGCTAATGGTTCACCTAACCCATCAGGTTCTTCTGGAAATGTGGCTAACTACATGGGCCAAATGGCCATGGCCATGGGAAAGCTCGGTACACTCGAAGGGTTTCTTCGCCAGGCTGATAATCTGCGGCAACAAACATTGCAACAAATGCTTCGGATATTAACAACCAGACAATCAGCTCGAGCACTTCTTGCAATAAGCGATTATTTCTCCCGGCTGCGAGCCTTGAGTTCTCTATGGCTTGCGCGGCCAAGGGAGTAA 1368 0.4532 MGSRGRIAEDTNKIANGMPSYAPPLPPPNSMGMEGTNIHPSRISDFGALEQSLGFRVEDAMNLSRNPVFNQMKANSQALGADIQFGALSKSIANSDINHSTAIAGSQTLQQQKDSQPNLASTSGGHRENWGESNMGDGSPDTSTDDTEDKNQMAERGESSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQTHSMSGNGAMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVENFMTQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSEILKLLVSHLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi599g00004 455 Coils Coil 189 216 - -
Vivi599g00004 455 Pfam Basic region leucine zipper 166 212 IPR004827 GO:0003700|GO:0006355
Vivi599g00004 455 MobiDBLite consensus disorder prediction 143 172 - -
Vivi599g00004 455 FunFam BZIP family transcription factor 169 218 - -
Vivi599g00004 455 Pfam Seed dormancy control 253 328 IPR025422 GO:0006351|GO:0043565
Vivi599g00004 455 MobiDBLite consensus disorder prediction 107 141 - -
Vivi599g00004 455 CDD bZIP_HBP1b-like 170 222 - -
Vivi599g00004 455 PANTHER TRANSCRIPTION FACTOR TGA9 126 455 - -
Vivi599g00004 455 ProSiteProfiles DOG1 domain profile. 235 452 IPR025422 GO:0006351|GO:0043565
Vivi599g00004 455 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 173 188 IPR004827 GO:0003700|GO:0006355
Vivi599g00004 455 SUPERFAMILY Leucine zipper domain 170 213 IPR046347 GO:0003700|GO:0006355
Vivi599g00004 455 SMART brlzneu 166 229 IPR004827 GO:0003700|GO:0006355
Vivi599g00004 455 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 212 IPR004827 GO:0003700|GO:0006355
Vivi599g00004 455 Gene3D - 169 221 - -
Vivi599g00004 455 MobiDBLite consensus disorder prediction 107 172 - -
Vivi599g00004 455 MobiDBLite consensus disorder prediction 1 30 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi599g00004 135 455 bZIP Transcription Factor Family AT3G12250 73.112 2.23e-168 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi599g00004 DOG1 4.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi599g00004 K14431 - gmx:778136 729.169