Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi595g00014 ATGGCTTCCCCAGCTACACCTTCTCCACAGATTCTATTATTCAATCCAATCTTTGGAAACACAAAAACAATAAAAGGAGTAAGGTTTTTTAGGACAACGACAACCACAAAATCTTACACAATTTTACAAGTTCATGCTTCTAAGGACGACTCTCAGAGACCCAAAAAAGCACCACCTGGAACTGACACAAGAATCCATTGGGAGAATGAAGATGAAGGTTGGATTGGAGGTAGCACAAAACAGCAACAAACTAATGCAGATGTGAAACCTAAGAAGCTTTTGGGTGAAGACTTTGCTGATTTGCTGAATTTTCAAGGTTCTCATTATGAATTCTTAGGAATATCGCCAGATTCTGATCTAGAAGAAGTCAAAGTAGCTTTCAGGAAACTATCAAAAGAGTATCATCCAGACACAACTTCTCTCCCTCTAAAGACTGCCTCGGAAAAGTTCATGAAACTAAGAGAAGTTTACAATGTTCTCAGCGATGAAGAAAGTAGGAGATTTTATGACTGGACACTGGCTCAAGAGGTAGCAAGTCGCCAAGAAGAGAAGTTGAAAATTAACTTCGAGGATCCTTATGAGGTAGCACTGAGGAATTATAAACCTGTTCCAGACATGGTTGATCGCCTTGGTGGAAAGAATATGAAGCTTAGTGATCAAGCTGTTTCTGCTATCACTATTGATGTTTTTATCATTATTTTCTCAATATGTTGTCTCACTTATGTAGTTTTCTTTAAAGAATATTAA 747 0.3775 MASPATPSPQILLFNPIFGNTKTIKGVRFFRTTTTTKSYTILQVHASKDDSQRPKKAPPGTDTRIHWENEDEGWIGGSTKQQQTNADVKPKKLLGEDFADLLNFQGSHYEFLGISPDSDLEEVKVAFRKLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSDEESRRFYDWTLAQEVASRQEEKLKINFEDPYEVALRNYKPVPDMVDRLGGKNMKLSDQAVSAITIDVFIIIFSICCLTYVVFFKEY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi595g00014 248 MobiDBLite consensus disorder prediction 48 66 - -
Vivi595g00014 248 PRINTS DnaJ domain signature 127 142 IPR001623 -
Vivi595g00014 248 PRINTS DnaJ domain signature 109 127 IPR001623 -
Vivi595g00014 248 PRINTS DnaJ domain signature 145 165 IPR001623 -
Vivi595g00014 248 MobiDBLite consensus disorder prediction 45 66 - -
Vivi595g00014 248 ProSitePatterns Nt-dnaJ domain signature. 150 169 IPR018253 -
Vivi595g00014 248 Gene3D DnaJ domain 100 193 IPR036869 -
Vivi595g00014 248 CDD DnaJ 108 162 IPR001623 -
Vivi595g00014 248 Pfam DnaJ domain 108 170 IPR001623 -
Vivi595g00014 248 ProSiteProfiles dnaJ domain profile. 107 173 IPR001623 -
Vivi595g00014 248 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 1 247 IPR044618 -
Vivi595g00014 248 SMART dnaj_3 106 165 IPR001623 -
Vivi595g00014 248 FunFam DnaJ homolog subfamily C member 4 98 194 - -
Vivi595g00014 248 SUPERFAMILY Chaperone J-domain 106 173 IPR036869 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi595g00014 108 175 C2H2 Transcription Factor Family AT1G74250 37.500 3.85e-08 51.6