Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi595g00005 | ATGGCATTTTGGGGAGTTGAAATCAAACCTGGAAAGCCTTTCACTCACCAACACGATGCTTCCCGAGGACGCCTCCATATTTCAATAGCCACTTTGGGGCTTGGCACTGCAATTACGAAAAGCACACTGCAATGTAATGTGGGAAATAAAAGCCCTGTTTTTCTTTGTGTTCTTTATCCTGGAAAAAGTGAGTCGTTGCAGTTGAATTTGGAGTTTGAAGAATATGGTAATGTTGTTCTCTCCGTCATTGGCCCTCGGAGTATTCATCTCTGCGGGTATTATCTTGCCCGTGGACACTATACCAATACTATGGGTGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAAACGGAGAGATCTGATCACAGTGACGAAGACGACTACGATGATAGTTTTATTGATGACGATGATACAGTTTTCCCACCATCTCCTATTTTCAATGAAGAGGAAGCTTCTTCTGATAGCGGTCGAAAAGTTACAAAAGGAAGCCGAAGAAGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCAGATGACAATGGCGGTTGTGAAGAAAAGAAAACTATTGGTGACAACATGCATGTTGAATCGCAGAAAATTGATGACCAAGATAGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGGAAGGGTCTTGGATCAGGAAATGGATGATAATGTTGATAAAGAAACAGTTGGTGCTGGCAACAAAGATGGTGAAGACCGAGAGGATAATACTATTGGTGAGTCAGATGACAATGGCGGTTGTGAAGAAAAGAAAACTATTGGTGACAACATGCATGTTGAATCGCAGAAAATTGATGACCAAGATAGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGGAAGGGTCTTGGATCAGGAAATGGATGATAATGTTGATAAAGAAACAGTTGGTGCTGGCAACAAAGATGGTGAAGACCGAGAGGATAATACTATTGAAACAACGTTGAAAACTGACAATGTTGTCGTGGACAGTCAGACTCATAGCAGGGAAGCTGAACCTTCAGATCAATTGGTAGAACCCTGCTCTGTTTTGGATGTTGGGGATATTAAAAAGTCAATTAAGAAAAAGAAGGAAAAGGAAAAAGAAACAAAGAGTTCTTGTCATGACCATTCCACCGAACTAGATAATGCTGTGCAAGATGAGCCAAAAATGAACACATCTCAGAATCTTCTGGCAGGAAATGAACAGAACCAGCAGCAAGCCGATGATAAGAAAGCTGAACCTTCAGATCAATTGGTTGATCCATGCCCTGTTCTGGAGGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAAAGGAAACAAAGAGTTCTGCTAATGGCCATTCCGCCGAAATAGGCAACGCCGTGCAGGATGAGCCAAAAATGAACACGACTCAGGATCTTCTGGAAGGAAATGAACAGAATCAGCATCAAGCTGATGATAAGAAAGTTGAAACCACGGATAAAATACTACCTTCCTCACAGGTTGGTCAGGGACAGGATGAAAAACCAAAGAGAAAAAGGAAGGAACGGTCCAAGGAAGAGACACTTGCTTGTATTAGCAATGTTACTAATCTGCCTCAGGCTCAGGGAAATGAACACAATAGTCAGGACACAGTTAATGGGGATGTTAAGATTTCAGACACTGTTGCACTGCCTTCCACTGAAACAGATTCTCAAAAGAAAACAAAGAAGAGAAAGAAAGAACATTTAAACAAAGCTTCACAACAGCCTGAAGGTGACAATGGAAATGGTGAAGCCAACAAAGAGACAGTAGAGTCTGATAGTCTGATTGATAAATTTTCTGAAAGGAAAGAGCAACATCCAAAGCTTACAATTGAAAACAATATGGACAACAATGGAAATCAATCTGAAGACAAGAAAGTTAAGAAAAAGAAGAAAAGTAAAAACAAAGGCAATGAAGTTGTAAATTCTGATGTGCCTTTATCCATTGAGCCAAGTACTGTGATGACGAAAGAGGATGGAAATAATACGGAGGATGCCAAGTCTTCCCAAGTCAGAACATTGTCAGATGGACTAGTTATTCAAGAGCTAGAGACCGGGAAAGCAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGAGTGGTGGTTGAGTCAAATGCTGGTGAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTAAGGGTTGGGATATTGGCCTTGAAGGTATGCAAGTTGGAGAAAAGAGAAGACTTGTGATACCACCGTCAATGACGTCTAAGAATGATGGAGACAGTGGCAGTATACCACCAAATTCATGGTTGGTTTATGACTTCGAACTGGTTAAAGTTCATTGA | 2388 | 0.4049 | MAFWGVEIKPGKPFTHQHDASRGRLHISIATLGLGTAITKSTLQCNVGNKSPVFLCVLYPGKSESLQLNLEFEEYGNVVLSVIGPRSIHLCGYYLARGHYTNTMGESESYGEDIADTETERSDHSDEDDYDDSFIDDDDTVFPPSPIFNEEEASSDSGRKVTKGSRRRLRKKYQLVESDDNGGCEEKKTIGDNMHVESQKIDDQDSLPISSICKNKASGRVLDQEMDDNVDKETVGAGNKDGEDREDNTIGESDDNGGCEEKKTIGDNMHVESQKIDDQDSLPISSICKNKASGRVLDQEMDDNVDKETVGAGNKDGEDREDNTIETTLKTDNVVVDSQTHSREAEPSDQLVEPCSVLDVGDIKKSIKKKKEKEKETKSSCHDHSTELDNAVQDEPKMNTSQNLLAGNEQNQQQADDKKAEPSDQLVDPCPVLEVGDIKKSKKKKKEKETKSSANGHSAEIGNAVQDEPKMNTTQDLLEGNEQNQHQADDKKVETTDKILPSSQVGQGQDEKPKRKRKERSKEETLACISNVTNLPQAQGNEHNSQDTVNGDVKISDTVALPSTETDSQKKTKKRKKEHLNKASQQPEGDNGNGEANKETVESDSLIDKFSERKEQHPKLTIENNMDNNGNQSEDKKVKKKKKSKNKGNEVVNSDVPLSIEPSTVMTKEDGNNTEDAKSSQVRTLSDGLVIQELETGKANGKIAALGKKISINYTGKLKENGVVVESNAGEAPFKFRLGKGEVIKGWDIGLEGMQVGEKRRLVIPPSMTSKNDGDSGSIPPNSWLVYDFELVKVH | 795 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 217 | 656 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 105 | 173 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 435 | 454 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 220 | 277 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 122 | 138 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 295 | 327 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 595 | 621 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 483 | 497 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 392 | 413 | - | - | |
| Vivi595g00005 | 795 | Gene3D | - | 663 | 795 | IPR046357 | GO:0003755 | |
| Vivi595g00005 | 795 | Gene3D | Nucleoplasmin core domain | 1 | 99 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 526 | 566 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 467 | 482 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 362 | 391 | - | - | |
| Vivi595g00005 | 795 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 704 | 792 | IPR001179 | GO:0003755 | |
| Vivi595g00005 | 795 | Pfam | Nucleoplasmin-like domain | 3 | 95 | IPR041232 | - | |
| Vivi595g00005 | 795 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 707 | 795 | IPR001179 | GO:0003755 | |
| Vivi595g00005 | 795 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 41 | 794 | - | - | |
| Vivi595g00005 | 795 | SUPERFAMILY | FKBP-like | 666 | 794 | - | - | |
| Vivi595g00005 | 795 | MobiDBLite | consensus disorder prediction | 509 | 525 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi595g00005 | 707 | 792 | Calmodulin-binding Proteins | AT5G48570 | 40.698 | 1.40e-14 | 75.5 |