Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi594g00016 ATGGCAGATAGTTCAGTATCATTCTTATTGGACAAGCTAACTTTCTTACTTCAAGAAGAAGTGAATTTACAAAGAGGTGTTCGTGAAGATGTTCAATACATCAAAGACGAACTCGAACGCCACAAAGCCATCTTGATGATGGCTGATTCAATGGAAGACAGGGACCCTGAACTCAAAGTATGGGTTAAAAGGGTAAGAGATATTGCTGAAGACATGGAAGATGCTATAGATGAATTCAGTATTCGCCTTGTTGATCATCGTCAAGGAAACAATCATCAACAAGGAAACAAAAATTCTTTTATTCATAGGATGGTTTTTGGCCTCAAGACCCTTGGAGCTAGGCACAGAATAGCGTCGGACATACAAGGAATCAAATCCAAAGTTGAAGTTCTCGCTCATGGACGTCCAATCATTTCTGGTGTAGGTTCTGGCTCAAGTCAAAGGCTTTCATCAAGGCTTGATAGTCAAGGTGATGCTCTTTTGCTAGAGGAAGCTGATTTAGTTGGAATTGAACAACCAAAGAAGCAAGTATGTGATTTGCTTTTCAAAGATGAATCAAATAGAGCTGTGATTTCAATCTATGGAATGGGAGGTTTAGGGAAAACAACATTAGCAAAACAAGTCTATGATGATCCAAAAGTCAAGAAACGTTTCAGGATTCATGCTTGGGTTAATCTCTCTCAATCTTTCAAGATGGAAGAGTTGCTCAAAGACCTCTTTCAACAGCTTCATAGTGTCATTGGTAAACCAGTTCCAGAAGCCGTTGGAACGATGAAAATCGAAAAGGTGAAAGAGTCGATCAAGAATTTGCTTCAAGGAAGTAGGTATCTGATTGTGCTTGATAATGTGTGGCATGTTAATGTATGGGATGCTGTGAAGTTTGCTTTGCCTAATAAGAACCGCGGAAGTAGAGTGATGATTACCACGCGAAACAAAGATATAGCGTTGTATTCGTGTGCTGGATTTGGTAAGAATTTTCACCTTGAGTTCTTACCCGAGCAAGAAGCTTGGTCACTTTTTTGTAGGAAGACATTTCAAGGTAACTCGTGTCCGCCTCATCTTGAAGAAGTTTGTAGGAAGATCTTGAAATTGTGTGGAGGGTTGCCACTAGCAATTGTGGCAGTCAGCGGTGCTTTGGCTACAAGAGGAACGTCGAACATCGAAGAGTGGCAGATAGTTTGCAGAAGTTTTGGATCTGAAATTGATGGCAATGACAAACTGGAGGATATGAAGAAAGTACTTTCCTTAAGTTTCAATGAGCTGCCTTACTATCTTAAATCATGTTTGTTGTATTTAAGCATGTTTCCTGGACGTCAAGCTATCGAGCATACGAGATTGATTCGGTTGTGGATAGCTGAAGGGTTTGTAAATGGCGAAGATGGTAAGACATTAGAGGAAGTTGCAGATAGTTACCTTAAAGAGCTTTTGAACAGAAGTTTTCTCTATGTGGTAGAAAAAACTACTGATGGAAGGATGAAGACTTGTCGCATGCATGACCTTCTAAGAGAAATTATCAATTTCAAGTCAAAGGATCAAAACTTTGCTACCGTAGCAAGAGAGGAAGAATTGGTATGGCCGGAACGAGTTCGTCGTTTATCGGTCATAAATTCATCACATGATGTACTTAGACAGAATAAGACCAGATTCAAACTTAGGTCTCTGCTAATGTTTGCATTGCCAGACTCACTCAATCCTTTTTCTCTCCATGATCTATGCTCCTCCACTGGTGTTAAGTTGCTCAGGGTGTTAGATTTAAAGGACGCGCCGTTGGAAGATTTTCCTGCTGAAATTGTCAATCTTTACCTTCTCAAGTATCTAAGTTTGAAGAACACAAAGGTGAAAAGCATTCCAGGTTCCATTAAGAAGCTGCAAAACTTGGAGACATTGAATCTTAAACACACTTATGTCACTGAATTGCCTGTTGAAATCACGGAGCTGAAACGACTACGCCATCTCCTCGTGTATCGTTACGAGATTGAATCCTATGCTCATTTCCACTTAAGGCATGGATTCAAAGTGGTGGCACCTATAGGAAACATGCTATCTTTGCAAAAGCTTTGTTTCATAGAGGTAGATCAAGGAAGTGGAGCATTGATGGTTGAGCTAGGAAAACTCACTCAACTTAGGAGGCTAGGCATTCGAAAAATGAGGAAAGAAGACGGTCCCGCTTTGTGTTTAGCCATTGAGAAAATGATCCATCTTAGATCATTGTCCATAACTGCAATAAACGAAGACGAGATAATCGATATTCACAACATCTCAAAGCCTCCTCAGTATCTTCAGCAGCTATACTTGAGCGGTCGTTTAGAGAAGTTTCCACAATGGATAAACTCTCTCAAGAACTTGTTCAGAGTTTTCTTAAAGTGGAGCAAATTAAAGGAGGACCCTCTTCAGTATCTTCAAAACTTGCCAAATCTTCGTCATCTTGAGTTTCTTCAAGTGTACGTTGGCGAGACATTGCATTTCAACGCAAACGGGTTTCAAAATCTAAAAGTTTTAGGCCTCGATGATCTAGAAGGATTAAACTCAATGACAATTGAGGAGGGAGCAATGCAGGGTCTTAAAAAGTTGGTCATTCAACGCTGCGGTTCATTCAAGATTGTACCATTAGGCATTGAACACTTAACTAAGCTAAAAACAATCGAGTTCTTCGATATGCCGGATGAGTTGATTACGGCGCTGCGTCCAAATGGAGGGGATGATTACTGGAGAGTACAGCATGTTCCAACAGTTTATTCTACATACTGGAGGGATGGTGGTTGGGATGTTTATTCATTAGAGACTTTTGGGGAGAGAGTGACTGATTCCGATCATAGTACTGCAAAGAGGACTCTTGAGCCTCCTACTCTTTGGAAGGTTTAG 2862 0.405 MADSSVSFLLDKLTFLLQEEVNLQRGVREDVQYIKDELERHKAILMMADSMEDRDPELKVWVKRVRDIAEDMEDAIDEFSIRLVDHRQGNNHQQGNKNSFIHRMVFGLKTLGARHRIASDIQGIKSKVEVLAHGRPIISGVGSGSSQRLSSRLDSQGDALLLEEADLVGIEQPKKQVCDLLFKDESNRAVISIYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWVNLSQSFKMEELLKDLFQQLHSVIGKPVPEAVGTMKIEKVKESIKNLLQGSRYLIVLDNVWHVNVWDAVKFALPNKNRGSRVMITTRNKDIALYSCAGFGKNFHLEFLPEQEAWSLFCRKTFQGNSCPPHLEEVCRKILKLCGGLPLAIVAVSGALATRGTSNIEEWQIVCRSFGSEIDGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSMFPGRQAIEHTRLIRLWIAEGFVNGEDGKTLEEVADSYLKELLNRSFLYVVEKTTDGRMKTCRMHDLLREIINFKSKDQNFATVAREEELVWPERVRRLSVINSSHDVLRQNKTRFKLRSLLMFALPDSLNPFSLHDLCSSTGVKLLRVLDLKDAPLEDFPAEIVNLYLLKYLSLKNTKVKSIPGSIKKLQNLETLNLKHTYVTELPVEITELKRLRHLLVYRYEIESYAHFHLRHGFKVVAPIGNMLSLQKLCFIEVDQGSGALMVELGKLTQLRRLGIRKMRKEDGPALCLAIEKMIHLRSLSITAINEDEIIDIHNISKPPQYLQQLYLSGRLEKFPQWINSLKNLFRVFLKWSKLKEDPLQYLQNLPNLRHLEFLQVYVGETLHFNANGFQNLKVLGLDDLEGLNSMTIEEGAMQGLKKLVIQRCGSFKIVPLGIEHLTKLKTIEFFDMPDELITALRPNGGDDYWRVQHVPTVYSTYWRDGGWDVYSLETFGERVTDSDHSTAKRTLEPPTLWKV 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi594g00016 953 CDD RX-CC_like 2 128 IPR038005 -
Vivi594g00016 953 FunFam Probable disease resistance protein At1g63360 418 507 - -
Vivi594g00016 953 Gene3D Ribonuclease Inhibitor 551 895 IPR032675 -
Vivi594g00016 953 PRINTS Disease resistance protein signature 190 205 - -
Vivi594g00016 953 PRINTS Disease resistance protein signature 365 379 - -
Vivi594g00016 953 PRINTS Disease resistance protein signature 621 637 - -
Vivi594g00016 953 PRINTS Disease resistance protein signature 270 284 - -
Vivi594g00016 953 Pfam NB-ARC domain 171 419 IPR002182 GO:0043531
Vivi594g00016 953 Gene3D - 418 508 IPR036388 -
Vivi594g00016 953 Pfam Rx N-terminal domain 6 92 IPR041118 -
Vivi594g00016 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 432 IPR027417 -
Vivi594g00016 953 PANTHER DISEASE RESISTANCE PROTEIN RP 32 863 IPR044974 GO:0006952
Vivi594g00016 953 Gene3D - 330 417 IPR042197 -
Vivi594g00016 953 Gene3D - 5 118 - -
Vivi594g00016 953 Gene3D - 156 319 IPR027417 -
Vivi594g00016 953 SUPERFAMILY L domain-like 496 888 - -
Vivi594g00016 953 FunFam Probable disease resistance protein At1g61300 158 320 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi594g00016 190 372 WRKY Transcription Factor Family AT5G45050 27.174 1.53e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi594g00016 K13457 - gmx:100305458 1438.32