Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi593g00006 ATGGATCATCATCATGAAATCATCACTGCTCAAACTAAAACCCTAGCATCATCATCATCATCATCATCGTCAACATATAATGATGATAACAACAAGAAAATGTATAGAGGTGTGAGAAAGAGGAAGTGGGGAAAATGGGTATGTGAAATAAGGCTACCCAATAGCCGTGACAGAATCTGGTTAGGATCATACGATTCACCAGAAAAAGCAGCAAGAGCATTCGACGCTGCACTTTACTGTCTTCGTGGTCGTCATGCAACTTTCAATTTCTCTGATTCACCTTTTCATTTGGAAAACACTGCAGTTTCTAACGATCCACAACAGATTCGAGAGATTGCTGCTAACTTTGCCAACAAAAATCCACCAATTGTTATTGATAATAATAATAATCATAATAATGGAAATAATAATACAGATCAATCCAATATTGTGGGTGAAATTATTGGCTCTTCGTCTTCTACTAGTACTACTATGCATGATAGTGGGAACACGATTGATTGGACATTTTTGAACATGTTAGAAGAACATGGTTCAAGCAATGATCCTAATTTAGTTAGTTCTGAAAATTATGATGATTTTTTCTATTCTGATTTAGAAAAGATGCATTCGGATGAGTTATTGTATTACACTTTACCGCCACTTTTTGAGGATAATAATACTAATCAGAAGGAATTAGTAGAAGTTGAAGGTGATAATGATGTTTATGATGACCCTTTTTCTCATCAATCATTCCTTTGGAGCTGGAACTTCTGA 753 0.3519 MDHHHEIITAQTKTLASSSSSSSSTYNDDNNKKMYRGVRKRKWGKWVCEIRLPNSRDRIWLGSYDSPEKAARAFDAALYCLRGRHATFNFSDSPFHLENTAVSNDPQQIREIAANFANKNPPIVIDNNNNHNNGNNNTDQSNIVGEIIGSSSSTSTTMHDSGNTIDWTFLNMLEEHGSSNDPNLVSSENYDDFFYSDLEKMHSDELLYYTLPPLFEDNNTNQKELVEVEGDNDVYDDPFSHQSFLWSWNF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi593g00006 250 FunFam Ethylene-responsive transcription factor 2 33 92 - -
Vivi593g00006 250 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Vivi593g00006 250 MobiDBLite consensus disorder prediction 10 32 - -
Vivi593g00006 250 Pfam AP2 domain 35 83 IPR001471 GO:0003700|GO:0006355
Vivi593g00006 250 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
Vivi593g00006 250 CDD AP2 35 93 IPR001471 GO:0003700|GO:0006355
Vivi593g00006 250 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 174 - -
Vivi593g00006 250 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Vivi593g00006 250 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Vivi593g00006 250 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Vivi593g00006 250 MobiDBLite consensus disorder prediction 10 31 - -
Vivi593g00006 250 SUPERFAMILY DNA-binding domain 34 93 IPR016177 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi593g00006 35 180 AP2-EREBP Transcription Factor Family AT1G19210 51.701 1.52e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Vivi593g00006 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi593g00006 - - psat:127084170 301.212