Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi593g00006 | ATGGATCATCATCATGAAATCATCACTGCTCAAACTAAAACCCTAGCATCATCATCATCATCATCATCGTCAACATATAATGATGATAACAACAAGAAAATGTATAGAGGTGTGAGAAAGAGGAAGTGGGGAAAATGGGTATGTGAAATAAGGCTACCCAATAGCCGTGACAGAATCTGGTTAGGATCATACGATTCACCAGAAAAAGCAGCAAGAGCATTCGACGCTGCACTTTACTGTCTTCGTGGTCGTCATGCAACTTTCAATTTCTCTGATTCACCTTTTCATTTGGAAAACACTGCAGTTTCTAACGATCCACAACAGATTCGAGAGATTGCTGCTAACTTTGCCAACAAAAATCCACCAATTGTTATTGATAATAATAATAATCATAATAATGGAAATAATAATACAGATCAATCCAATATTGTGGGTGAAATTATTGGCTCTTCGTCTTCTACTAGTACTACTATGCATGATAGTGGGAACACGATTGATTGGACATTTTTGAACATGTTAGAAGAACATGGTTCAAGCAATGATCCTAATTTAGTTAGTTCTGAAAATTATGATGATTTTTTCTATTCTGATTTAGAAAAGATGCATTCGGATGAGTTATTGTATTACACTTTACCGCCACTTTTTGAGGATAATAATACTAATCAGAAGGAATTAGTAGAAGTTGAAGGTGATAATGATGTTTATGATGACCCTTTTTCTCATCAATCATTCCTTTGGAGCTGGAACTTCTGA | 753 | 0.3519 | MDHHHEIITAQTKTLASSSSSSSSTYNDDNNKKMYRGVRKRKWGKWVCEIRLPNSRDRIWLGSYDSPEKAARAFDAALYCLRGRHATFNFSDSPFHLENTAVSNDPQQIREIAANFANKNPPIVIDNNNNHNNGNNNTDQSNIVGEIIGSSSSTSTTMHDSGNTIDWTFLNMLEEHGSSNDPNLVSSENYDDFFYSDLEKMHSDELLYYTLPPLFEDNNTNQKELVEVEGDNDVYDDPFSHQSFLWSWNF | 250 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi593g00006 | 250 | FunFam | Ethylene-responsive transcription factor 2 | 33 | 92 | - | - | |
Vivi593g00006 | 250 | SMART | rav1_2 | 34 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi593g00006 | 250 | MobiDBLite | consensus disorder prediction | 10 | 32 | - | - | |
Vivi593g00006 | 250 | Pfam | AP2 domain | 35 | 83 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi593g00006 | 250 | Gene3D | AP2/ERF domain | 33 | 92 | IPR036955 | GO:0003700|GO:0006355 | |
Vivi593g00006 | 250 | CDD | AP2 | 35 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi593g00006 | 250 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 17 | 174 | - | - | |
Vivi593g00006 | 250 | ProSiteProfiles | AP2/ERF domain profile. | 34 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi593g00006 | 250 | PRINTS | Ethylene responsive element binding protein signature | 57 | 73 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi593g00006 | 250 | PRINTS | Ethylene responsive element binding protein signature | 35 | 46 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi593g00006 | 250 | MobiDBLite | consensus disorder prediction | 10 | 31 | - | - | |
Vivi593g00006 | 250 | SUPERFAMILY | DNA-binding domain | 34 | 93 | IPR016177 | GO:0003677 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi593g00006 | 35 | 180 | AP2-EREBP Transcription Factor Family | AT1G19210 | 51.701 | 1.52e-37 | 128 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Vivi593g00006 | AP2 | 1e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi593g00006 | - | - | psat:127084170 | 301.212 |