Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi591g00003 ATGCGTTCGAGTTTGGGGTCAAGTTCAGTGTTAAATGAATCTTTCATAGTTGGTAGGGAGGACGATAAAGAGAAATTGATGAATATGTTGTTGTCGGATACTGGCACGAACCTAGATGTTGTTGCAATTTTTGGTGTTGGAGGGGTTGGTAAAACTACACTTGCTGAACTAGTTTACAATGATAAAGAAGTTAATGATCATTTTGATTTGAAAATGTGGATTCGTGTGTCGGAAGATTTTGATATTGCGAGAATAATAAGAACTCTTCTTACATCTGTATGTTCATTAACTTATGACGAGAACGACGATCTTGATTATATTCGATTTGAGTTAAAGCAGAAGTTGAATTGTAGAAGATTTTTATTTGTTTTGGATGACCTATGGAATGTTGGTTATAATGATTGGCATGAGTTGGTAGCTCCTTTGGTTAATGGAAAATTGGGAAGCAGGGTGATCATCACGACGCGTCAAGAAAAAGTTGCAGAGGTTGTGCATACATTTCCAATTCATAAATTAGAACCTTTGTCAGACGAAGACTGTTGGTCTTTACTTTCCAAGCATGCATTTGGAAGTAAAGTTTATGGTGGCAGTGAATACCCAGATCTTGAAGCAATTGGTAGGAAAATTGCAAGAAAGTGTCTAGGATTGCCACTAGCTGCCAAAACACTTGGTGGACATTTTTCTTCAACTGTAGATTTAAAGGACTGGATTTCAATTTTGATTAGCAACATATGGAAGATACCAGATAATAATATTCTTCCATCTTTGCTTTTGAGTTATCAATGTCTTCCCTCTCATTTGAAAAGATGTTTTGCCTATTGCTCAGTTTTTCCGAAGGGTTATTCCTTTAATAGGAAGCAGATGATTTTGTTGTGGATGGCAGAAGGCTTCCTTGAACATTGTCAGGATGAAAAAGCACCAGAAGAAGTAGGTGATGACTACTTTGTTGAATTGTTATCGAGATCCTTCATTCAACAGTTGAAAGATGACAGTGAGAGAGAAAAGTTTGTTCTGCATGACCTTCTTTATGATTTAGCCGAGATTGTATCTGGGAAAAGTTGTTGCAAGCTCGAATGCAGTGGCATCATGTCAAAAAAGGTTCAACATTTGTCATATATTCAACACGAGTATGACACTTTCAAGAAGTTTGAGATTTTCCACGATTTTGAAAGCTTGCGAAGCTTCTTGCCTATTTGCATTCGCCGGGGTTTGAATTACTTATCGAGAAAGGTGGTGGATGATTTGCTGCCGACACTCAGAAATTTGCGCGTGCTATCGTTATCACATCACAGAAACTTCACCATGTTACCAGGTTCTATTTATAATTTGTTGCATTTGCGGTATCTCGACCTCTCTCACACTGATATCAAAAACCTGCCTGAATCAATATGTCACCTGTACTATTTGCAAACCTTAAAGTTATCAATGTGCTTATATCTCACTGAATTGCCGGTAGACATCGGAAAGCTAATTAATTTACGCCACCTTGATATCAGTAACTCTCGCATTAAAAAGATGCCAATGCAAATTGTTCGATTGGAAAATCTTCAGACTCTATCTGTTTTCAGAGTGGGCAAGCAAGAAGTTGGGTTAAGTGTGAGAGAACTTGGGAAGTTTCCTAACATTCAGGGAAAACTTTACATTGGAAATCTGTGTAATGTCATCAATGTCAGTGAAGCATGTGATGCCAACTTGAAGAATAAAGAACTCATTGATGAGTTAGAGTTATGTTGGAAACAAGAAGAAGAACAGTTAGAGTTATTTTGGGAAGAAGAAGAAGAAGAACGACCACATGATTCACAAACACAAACAGTTGTGCTTGATGGGTTGCAACCATCAATAAACTTGAAGAAATTGATCATTGGCAGTTATCGCGGGACAAGTTTTCCAAGTTGGTTGGGAGATTCTTCATTTTCTAACATGGTGTACTTGCGCATATGTTATTGTGAATATTGTGTCACACTTCCATCATTAGGGCAACTACCTTCTCTCATAGATCTAAGTATAGATGGTATGTCGATATTGGAGACAATTGGTCCAGAGTTCTATGGCATGTCAGGTGGAGGTTTTAATTCTTCGTTCCAACCATTTCCATCCCTTGAGCATCTAAAATTTTCCTACATGTCTAATTGGAAGGAATGGCATTCCTTCGGAGGCAGTAAGTTTCCGTTTCCTCGTCTTAAAACTCTGAAGTTAGATAATTGTCCTAAACTGGAGGGACATTTGCCTAGTCATCTTCCTTCCATAGAGAAAGTTCAAATTCATTGCTGTAATCAGTTGTTGGCTACACTATCTACTTTGCAATGGCTTTCCTCGGTAAAATCTTTAGATGTGGTAAAATCTTTAGACATTCAATGTTCAGACTCCATCGAATGGTCGTTGTCTGAAAGTAATTCTGCATGTCTTCTGCAGCGGCTAATAATATGGAACTTCAGGATGATGTTGTCTCTACCTAAATCGTTTATGAGCCCTACTTGTCTTCAACACTTAGAACTCCATTCAATTCCATCTCTCTTGTCATTTCCGGATGATGGTCTACCCACTTCTCTACAATCACTAGAACTCCATTCACTTCCATCTCTCTTGTCATTTCCGGATGATGGTCTACCCACTTCTCTACAATCACTACGAATTTCTGACTGTGAAAATTTAGCATTCTTGCCTCCTGAAACATGGAGCAAGTACACATCACTTGTGTCTTTGGTGTTAACGCATTCATGTGATGCACTTACCTCCTTCCCACTGAATGGTTTCCCTATGCTCCAAAGGCTTGATATTGCAAACTGTGGAAATCTGCAATCCCTTTTTATTTCAGAAATTTATTCCCATACCTGTTGGCCGTCATCCCTCCAGTCACTTGATATTTTCAACTGTAATGCACTTATATCACTTCCTCAACGGATGGACACCCTCATTGCTCTTGAAAGCTTGCATCTCACATTACAATCATTGCCATGCTACGAAGGAGCTAGCCTCCCTCCCAACTTACGATCAATTTACATTGAAATTGAATCCTTGAGAACAAAAACGTTTGCAACCGGATGGGGTCTCCAAAACCTTAGTGCTCTGTCTGTTTTGGATATCAGAGGTGATGGTATTGTTAACACCTTGTTGAAGGAGCAGTTGCTGCCGGTTTCTCTCGTGTCTCTGTCAATAAATTTTCTCTCTAAAAGGAAATCCTTACCAGGAAATGGACTTCGACACCTCTCCTCTCTTGAAAAGCTTAGATTTAATAGTTGTTCAAAGCTTGGCTCATTGCCAGAAAACATGTTTCCTTCCTATCTGAAAACACTTGATATTTCAAATTGCCCAAAACTTAAGTCCTTGCCGGACAGGTTACCTTCCTCTTTGGAAAAACTGAAGCTGGAGTATTGTCAAAGACTTGGGTCATTGCCGAAAGACGGTCTCCCTTCTTCTCTTAAGCAACTGAGCATTAGTGAGTGTCCTCTGTTAAAAGCAAAGTATGAAAATCAGAAGGGGGAACATTGGTCCAGCATTGCTCACATCCCTGTCATAGAAATAGATGATGAATTGACAATATGA 3543 0.3898 MRSSLGSSSVLNESFIVGREDDKEKLMNMLLSDTGTNLDVVAIFGVGGVGKTTLAELVYNDKEVNDHFDLKMWIRVSEDFDIARIIRTLLTSVCSLTYDENDDLDYIRFELKQKLNCRRFLFVLDDLWNVGYNDWHELVAPLVNGKLGSRVIITTRQEKVAEVVHTFPIHKLEPLSDEDCWSLLSKHAFGSKVYGGSEYPDLEAIGRKIARKCLGLPLAAKTLGGHFSSTVDLKDWISILISNIWKIPDNNILPSLLLSYQCLPSHLKRCFAYCSVFPKGYSFNRKQMILLWMAEGFLEHCQDEKAPEEVGDDYFVELLSRSFIQQLKDDSEREKFVLHDLLYDLAEIVSGKSCCKLECSGIMSKKVQHLSYIQHEYDTFKKFEIFHDFESLRSFLPICIRRGLNYLSRKVVDDLLPTLRNLRVLSLSHHRNFTMLPGSIYNLLHLRYLDLSHTDIKNLPESICHLYYLQTLKLSMCLYLTELPVDIGKLINLRHLDISNSRIKKMPMQIVRLENLQTLSVFRVGKQEVGLSVRELGKFPNIQGKLYIGNLCNVINVSEACDANLKNKELIDELELCWKQEEEQLELFWEEEEEERPHDSQTQTVVLDGLQPSINLKKLIIGSYRGTSFPSWLGDSSFSNMVYLRICYCEYCVTLPSLGQLPSLIDLSIDGMSILETIGPEFYGMSGGGFNSSFQPFPSLEHLKFSYMSNWKEWHSFGGSKFPFPRLKTLKLDNCPKLEGHLPSHLPSIEKVQIHCCNQLLATLSTLQWLSSVKSLDVVKSLDIQCSDSIEWSLSESNSACLLQRLIIWNFRMMLSLPKSFMSPTCLQHLELHSIPSLLSFPDDGLPTSLQSLELHSLPSLLSFPDDGLPTSLQSLRISDCENLAFLPPETWSKYTSLVSLVLTHSCDALTSFPLNGFPMLQRLDIANCGNLQSLFISEIYSHTCWPSSLQSLDIFNCNALISLPQRMDTLIALESLHLTLQSLPCYEGASLPPNLRSIYIEIESLRTKTFATGWGLQNLSALSVLDIRGDGIVNTLLKEQLLPVSLVSLSINFLSKRKSLPGNGLRHLSSLEKLRFNSCSKLGSLPENMFPSYLKTLDISNCPKLKSLPDRLPSSLEKLKLEYCQRLGSLPKDGLPSSLKQLSISECPLLKAKYENQKGEHWSSIAHIPVIEIDDELTI 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi591g00003 1180 FunFam Probable disease resistance protein At1g63360 260 348 - -
Vivi591g00003 1180 SMART LRR_typ_2 1069 1093 IPR003591 -
Vivi591g00003 1180 SMART LRR_typ_2 443 466 IPR003591 -
Vivi591g00003 1180 SMART LRR_typ_2 490 513 IPR003591 -
Vivi591g00003 1180 Gene3D - 2 167 IPR027417 -
Vivi591g00003 1180 ProSiteProfiles Leucine-rich repeat profile. 445 466 IPR001611 GO:0005515
Vivi591g00003 1180 Gene3D - 260 348 IPR036388 -
Vivi591g00003 1180 FunFam Probable disease resistance protein At1g61300 3 166 - -
Vivi591g00003 1180 SUPERFAMILY L domain-like 338 780 - -
Vivi591g00003 1180 Pfam NB-ARC domain 19 237 IPR002182 GO:0043531
Vivi591g00003 1180 Gene3D Ribonuclease Inhibitor 991 1160 IPR032675 -
Vivi591g00003 1180 Gene3D Ribonuclease Inhibitor 846 990 IPR032675 -
Vivi591g00003 1180 Gene3D - 174 259 IPR042197 -
Vivi591g00003 1180 PANTHER DISEASE RESISTANCE PROTEIN RP 21 735 IPR044974 GO:0006952
Vivi591g00003 1180 Gene3D Ribonuclease Inhibitor 401 781 IPR032675 -
Vivi591g00003 1180 Coils Coil 1180 1180 - -
Vivi591g00003 1180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 274 IPR027417 -
Vivi591g00003 1180 PRINTS Disease resistance protein signature 417 433 - -
Vivi591g00003 1180 PRINTS Disease resistance protein signature 40 55 - -
Vivi591g00003 1180 PRINTS Disease resistance protein signature 114 128 - -
Vivi591g00003 1180 PRINTS Disease resistance protein signature 213 227 - -
Vivi591g00003 1180 SUPERFAMILY L domain-like 774 1152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi591g00003 436 519 WRKY Transcription Factor Family AT4G12020 42.353 2.33e-08 57.0