Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi58g00009 ATGGAGTTGGTTGAAGGAAGGGTTCAAAATAACTCTCCAAAATTGGAATTTCATCACAACCCATGTGTAGAATTTTTCTGTCTGAATTATCTGAAGGAGGCGAGACATTCAAGTTGGAATGTAGCTGCAAAGGTGAACTTTGCTTTGGCTCACCAAGAATGTGCTATTAAATGGTTTAGTATAAAGGGTACTAGAACTTGTGATGTCTGCAAAAAGGATGTTAGAAACCTTGCTGTCACTCTATTACAGATTCAAAGTGTTCGAAATCGATTTGCTGGAGCAAGTAGATCTCAACTCGAAGATGTAAACGAGTACATGGTTTGGCAGGAAGTTCCACTGCTTGTCATTGTTAGCATGTTGACATATTTTTGTTTTCTTGAGCATCTGTTGGTTACAAAAATGGGAACCGGTGCATTTGCCATATCTCTTCCATTTTTCTGTGTACTAGGCCTGCTCTCCTCCATGACATCATCAACCATGGGTAGGTTTGCAAGAGTTTAG 501 0.3972 MELVEGRVQNNSPKLEFHHNPCVEFFCLNYLKEARHSSWNVAAKVNFALAHQECAIKWFSIKGTRTCDVCKKDVRNLAVTLLQIQSVRNRFAGASRSQLEDVNEYMVWQEVPLLVIVSMLTYFCFLEHLLVTKMGTGAFAISLPFFCVLGLLSSMTSSTMGRFARV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi58g00009 166 PANTHER OS02G0165000 PROTEIN 46 160 - -
Vivi58g00009 166 SUPERFAMILY RING/U-box 47 73 - -
Vivi58g00009 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 26 75 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi58g00009 44 78 C3H Transcription Factor Family AT2G37950 45.714 1.02e-06 45.1