Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi58g00004 ATGGCTCCTTCTTTCACAGTAACTTCACGTTTTCATGAATCCTTCACACGAAGTGCACTTCGCTCTTATCTCGCTGAGTTTATCTCAACTTTCTTCTATGTCCTTATTGTTGTTGGTTCTGGAATGTCCTCAAGGAAGTTGATGCCTGATGCTTCACTGAACCCAACAAGTTTGGTTGTGGGTGCTATTGCAAATGCGTTTGCTCTGTCCTCAGTTTTGTACATTGCATGGGACATCTCTGGTGGACACGTGAATCCTGCCGTGACATTTGCAATGGCTGTTGGAGGACATATTAGTGTCCCAACTGCTCTCTTCTATTGGGTTGCGCAACTTATTGCATCTGTCATTGCTTGCCTTTTTCTCAAAGTCATTGTTGTTGGAATGCATGTACCAACCTATGTAATTGCAGAAGAGATGACAGGATTTGGAGCATCAATATTAGAGGGTATCCTAACATTTGTGTTAGTGTACACAATATATGCTGCAAGGGACACCAGGCGTGGTCAAGTAAGTTCAACAGGAATACTTATAATTGGATTAATAGCAGGAGCAGGTGTGTTGGCAGCAGGACCATTCTCTGGTGGATCCATGAACCCTGCATGTGCTTTTGGCTCTGCTTCCATTGCTGGAACTTTCAGAAATCAAGCTGTCTATTGGGTTGGACCTTTGGTTGGTGCTGCTGTTGCTGGTCTTCTTTATGACAATGTGTTGTTCCCTTCTCAGAATTCAGATTCAATTAGAGGAGGGGTTTCAAATGTGTAA 762 0.4331 MAPSFTVTSRFHESFTRSALRSYLAEFISTFFYVLIVVGSGMSSRKLMPDASLNPTSLVVGAIANAFALSSVLYIAWDISGGHVNPAVTFAMAVGGHISVPTALFYWVAQLIASVIACLFLKVIVVGMHVPTYVIAEEMTGFGASILEGILTFVLVYTIYAARDTRRGQVSSTGILIIGLIAGAGVLAAGPFSGGSMNPACAFGSASIAGTFRNQAVYWVGPLVGAAVAGLLYDNVLFPSQNSDSIRGGVSNV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi58g00004 253 Pfam Major intrinsic protein 17 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi58g00004 253 FunFam Probable aquaporin TIP5-1 5 245 - -
Vivi58g00004 253 Gene3D Glycerol uptake facilitator protein. 5 248 IPR023271 -
Vivi58g00004 253 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi58g00004 253 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi58g00004 253 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi58g00004 253 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi58g00004 253 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi58g00004 253 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi58g00004 253 PANTHER AQUAPORIN-8 9 239 IPR034294 -
Vivi58g00004 253 SUPERFAMILY Aquaporin-like 11 243 IPR023271 -
Vivi58g00004 253 ProSitePatterns MIP family signature. 83 91 IPR022357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi58g00004 8 243 Major Intrinsic Protein MIP AT3G47440 64.407 2.77e-107 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi58g00004 K09873 - gmx:100801448 410.609