Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi589g00008 ATGGATCCCAAAAACTCAAAACACCAACACACAAACAACACCATGGGAGATGATAACAACAACAACAGCAACAACAACAACAAACAACAAATTTCGGAATCAAAGAATCTGCAGATTGTGTCATCTGAAATTGAAACCAAACAAGATGAAACAAAGAAACAGCTTGCACCAAAGAGAACATCAAACAAAGACAGACACACAAAGGTTGAAGGACGAGGAAGAAGAATAAGGATGCCGGCTTTATGTGCGGCAAGAATATTTCAGCTGACCAAAGAGTTGGGCCATAAATCAGATGGTGAAACAATTCAATGGCTTCTTCAACAATCTGAAGCGTCGATTATAGCTGCAACAGGAACAGGAACAATACCGGCTTCAGCTATGACTTCATCGGGTAACAGTTTGACACCACAGGGTTCTTCTTTGTCTTCTGGTTTACAGTTGCAAACCAGCTGGCCTACCCATCAGGTTAGTTCATCAAGTTTATGGCCCCATGGATTTGGTTTTCATCAAACGTCTTCTGGTTTGACTACTGCAGCGGCTAGTGAGAATAGTTCGAGTTATTTTCAGAAAATTGGGTTTTCTGGATTTGATATGCCAGGGAGTAATTTGGGTGGGATGAGTTTTACATCAATTTTGGGTGGGAATCAGCAGATGCCACCTGGGTTGGAATTAGGTTTGTCGCAAGATGGACATATTGGGGTGTTGAATCAACAGGCTTTGAGTCAGATTTATCAGCAGTTTGGTCAAAATCATCAAACTAGGGTTCATCAGCAAAGTCAGAATCAGAATCCTAATAAGGATGATTCTCAAAGTTCTGAACAGTAG 825 0.4109 MDPKNSKHQHTNNTMGDDNNNNSNNNNKQQISESKNLQIVSSEIETKQDETKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTKELGHKSDGETIQWLLQQSEASIIAATGTGTIPASAMTSSGNSLTPQGSSLSSGLQLQTSWPTHQVSSSSLWPHGFGFHQTSSGLTTAAASENSSSYFQKIGFSGFDMPGSNLGGMSFTSILGGNQQMPPGLELGLSQDGHIGVLNQQALSQIYQQFGQNHQTRVHQQSQNQNPNKDDSQSSEQ 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi589g00008 274 ProSiteProfiles TCP domain profile. 62 116 IPR017887 -
Vivi589g00008 274 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 262 IPR005333 GO:0003700
Vivi589g00008 274 MobiDBLite consensus disorder prediction 126 145 - -
Vivi589g00008 274 MobiDBLite consensus disorder prediction 8 44 - -
Vivi589g00008 274 MobiDBLite consensus disorder prediction 45 72 - -
Vivi589g00008 274 Pfam TCP family transcription factor 60 215 IPR017887 -
Vivi589g00008 274 MobiDBLite consensus disorder prediction 249 274 - -
Vivi589g00008 274 MobiDBLite consensus disorder prediction 1 72 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi589g00008 1 244 TCP Transcription Factor Family AT3G27010 50.890 1.24e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi589g00008 TCP 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi589g00008 - - psat:127128219 445.277