Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi584g00017 ATGGCTCGATCAGTGCCTTTGGTTTCCACCATCTTTGTCTTATTTCTTCTTGTTGTAGCATCTGAGATGGGACCAAGTATTGTGGCAGAGGCAAGGATTTGCAAATCTCCAAGTGAAAAATTCAAAGGATTGTGTTATAGTTACCGCAATTGTGGTAATGTATGCCAAACAGAGGGTTTTGCTGGAGGAGAATGCCATGGCTTCCGTCGCAGATGCTTTTGCACCAAACCTTGTTAA 237 0.4304 MARSVPLVSTIFVLFLLVVASEMGPSIVAEARICKSPSEKFKGLCYSYRNCGNVCQTEGFAGGECHGFRRRCFCTKPC 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi584g00017 78 Pfam Gamma-thionin family 32 78 - -
Vivi584g00017 78 SMART gth_4 33 78 IPR003614 GO:0006952
Vivi584g00017 78 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Vivi584g00017 78 CDD Knot1 43 75 IPR003614 GO:0006952
Vivi584g00017 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Vivi584g00017 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Vivi584g00017 78 PANTHER DEFENSIN-LIKE PROTEIN 1 7 78 - -
Vivi584g00017 78 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Vivi584g00017 78 Gene3D - 31 78 IPR036574 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi584g00017 1 78 Plant Defensins Gene Families AT2G02100 53.846 1.62e-27 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi584g00017 - - gsj:114420878 124.405