Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi584g00015 ATGGCTCGTTCAATTTCTTTGGTCTCCACCATCTTTGTCTTCCTTCTCATTCTTGTGGCCACTGGGCCAAGAATGGTGGCAGAGGCAAGAGATTGTGAATCTAAAAGTCACAAGTTCAAAGGAAAATGTTTGAGTGACACCAACTGTGCTTCTGTGTGCAAAACAGAACGTTTCACTGGCGGACACTGCCGTGGATTCCGTCAAAGATGCTTTTGCACTACACACTGTTGA 231 0.4545 MARSISLVSTIFVFLLILVATGPRMVAEARDCESKSHKFKGKCLSDTNCASVCKTERFTGGHCRGFRQRCFCTTHC 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi584g00015 76 SMART gth_4 31 76 IPR003614 GO:0006952
Vivi584g00015 76 Gene3D - 30 76 IPR036574 -
Vivi584g00015 76 CDD Knot1 41 73 IPR003614 GO:0006952
Vivi584g00015 76 Pfam Gamma-thionin family 31 76 - -
Vivi584g00015 76 PANTHER DEFENSIN-LIKE PROTEIN 1 1 76 - -
Vivi584g00015 76 SUPERFAMILY Scorpion toxin-like 31 76 IPR036574 -
Vivi584g00015 76 ProSitePatterns Gamma-thionins family signature. 30 53 IPR008176 GO:0006952
Vivi584g00015 76 PRINTS Purothionin signature 31 46 IPR008176 GO:0006952
Vivi584g00015 76 PRINTS Purothionin signature 61 75 IPR008176 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi584g00015 1 76 Plant Defensins Gene Families AT2G02100 57.143 4.06e-27 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi584g00015 - - gmx:547843 134.806