Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi580g00015 ATGAGAAAAAACGACTTTCTCACGCCTAAGGCAATTGCCAATCGAATTAAAGCAAAAGGACTGCAAAAGCTTCGATGGTACTGCCAGATGTGCCAGAAGCAATGTCTGGTGTTACAGTGTCATGATGAGAATTGTTTCAAATGCCACTGCATGAGTGAAGGGCACCAGCGTCAAATGCAAATTTTTGGACAAAACCCAACCCGCATAGTTGAGGGCTATACCGAAGAATTTAAGACTACTTTTCTTGAGCACATGAAGCGCAACCATCGACTCAACCGTGTAGCTGCCACTGTAGTGTATAATGAATACATAAATGATAGGAATCACGCTCATATGAACTCCACAGAGTGGGCTACACTTACTGAGTTTGTTAAGTACTTGGGTCGAACTAGAAAATGTAAGGTTGAAGAAACACCCAAGGGATGGTTCATTACATACATAGATAAAGATTCATACACCCTTTTCAAGAAGAAGATGAAGAATAAGAGAATCAAGGCAGATTTGGTAGATGAAAAAAAACAAGAGAAGGAGATCCAGAAACAGATTGAAAGGGCTGAGCAATTGATGCTGCTATCTAATCCAGAGTCCAATCAGCCTTCACAGGTAGAGACTATAAGGGAACTAAATGCAGAAGATGGAATTAAGATAGGATTTTCTCTTGGGTCGTCTGCTAAACCTATAGCTAAGGATAAAGGCAAGACATCGAGGATGGCGTTTGATGAGGTTGATGAAGAGAAATATGAGGAAAAGAATCGTGTAAAAAATTTGAAAAGGAAAGAAAGCGGCGGTGGAAAATCAACTCTTGATGAAATGATCAGGGAAGAAGAGAGGAAAAAGGAAAAAATCAACAGGAAGGATTATTGGTTGCATGAGGGAATTGTTGTTAAGGTTATGAGCAAAGTCTTGGCAGAGAAGGGATACTACAAACAAAAAGGTGTTATGAGGAAAGTAATTGACAAGTACATAGGGGAAATAAAAATGTTAGAAAGCAAGCATATGCTTAGAGTTGATCAGGAAGAGCTTGAAACTGTGATACCACAGGTTGGGGGACGTGTAAAAATAGTAAATGGGGCTTATCGTGGATCCCTTGCTAGGCTGCTCGGGGTGGATACATATCAATTTTGCGCTAAGGTGCAGATAGAGAAAGGCGCTTATGATAATAGGGTGCTTAAAGTTGTGGAATATGAGGACATATGTAAAGTAGCCTAG 1209 0.402 MRKNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCLVLQCHDENCFKCHCMSEGHQRQMQIFGQNPTRIVEGYTEEFKTTFLEHMKRNHRLNRVAATVVYNEYINDRNHAHMNSTEWATLTEFVKYLGRTRKCKVEETPKGWFITYIDKDSYTLFKKKMKNKRIKADLVDEKKQEKEIQKQIERAEQLMLLSNPESNQPSQVETIRELNAEDGIKIGFSLGSSAKPIAKDKGKTSRMAFDEVDEEKYEEKNRVKNLKRKESGGGKSTLDEMIREEERKKEKINRKDYWLHEGIVVKVMSKVLAEKGYYKQKGVMRKVIDKYIGEIKMLESKHMLRVDQEELETVIPQVGGRVKIVNGAYRGSLARLLGVDTYQFCAKVQIEKGAYDNRVLKVVEYEDICKVA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi580g00015 402 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 402 IPR037321 -
Vivi580g00015 402 Gene3D - 292 345 - -
Vivi580g00015 402 SMART Kin17_mid_2 57 183 IPR019447 -
Vivi580g00015 402 FunFam DNA/RNA-binding protein KIN17, putative 346 402 - -
Vivi580g00015 402 FunFam DNA/RNA-binding protein kin17-like 292 345 - -
Vivi580g00015 402 Pfam Domain of Kin17 curved DNA-binding protein 57 182 IPR019447 -
Vivi580g00015 402 Coils Coil 239 259 - -
Vivi580g00015 402 Gene3D - 65 165 IPR038254 -
Vivi580g00015 402 Gene3D - 346 402 IPR014722 -
Vivi580g00015 402 Coils Coil 265 285 - -
Vivi580g00015 402 Pfam KN17 SH3-like C-terminal domain 284 337 IPR041330 -
Vivi580g00015 402 Coils Coil 161 191 - -
Vivi580g00015 402 FunFam DNA/RNA-binding protein KIN17, putative 66 165 - -
Vivi580g00015 402 CDD KOW_KIN17 348 401 IPR041995 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi580g00015 1 402 C2H2 Transcription Factor Family AT1G55460 65.321 0.0 548