Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi580g00011 ATGGCTAGTGTTCTCCTTGTTGCTCTCCTCTTACTCATCCCAATTATCTTTCTGCTAAAACGAACCAAACCATCCAAAAGGGTCCCTCCAGGTACACTTGGAATTCCCATTATCGGTCAAAGTCTTGGCTTTCTTCGTGCTATGCGATCCAACACTGCAGAAAAATGGATTGAAGACAGAATAAACAAGTATGGTCCTATTTCAAAGCTAAATATCTTTGGAAAACCAACTGTTTTGATTCATGGACAGGCTGCAAATAAGTTTATATTTGCCAACAGCGGTAACAATATTGTTAACCAGCAAACAAAGTCTACTAAGATGATATTAGGTGAAAGGAACTTGCTTGAACTGAGTGGCAAAGATCATAGCAGAGTTAGAGGTGCACTTGTCTCATTCTTGAAGCCGGAATCTTTGAGACACTATGTCGGTAAAATTGATGAAGAGGTTAGAAGCCACCTTCAGATGCATTGGGAAGGGAAACAGCAGGTCAAGGTATTGCCCCTGATGAAGACTCTAACTTTCAACATAATTTGCTCTCTTCTGTTTGGTCTTGAGAGTGGAAAACAAAGAGATCAACTCATGAATCCTTTTCGAGCATTGATTAAAGGAGTGTGGTCAGTCCCAATCAATGCACCCTTCACAAGCTACAACCGCAGCCTCAGGGAAAGTACAAGGATACAAAACTTGTTGAAGGAGATTGTGCGCCAGAAGAAAGTTGAACACGAGAAAAATGGCGCGAAATCCCGCCAAGACTTGATTAGTTGCTTGCTTAGCATGGTTGAAGATGGTAAACAAGTTTTGACTGAGAAGGAAATCATCCATAATGCTATGCTTGTCATGGTTGCGGGGCATGACACGTCAGCTATTCTAATCACTTTCATTATCCGGCTCTTGGCTAACGATCAAGATATTTGTGCAGCTGTTCTTCAAGGTAGAGAAATCTATGTATTTGATTATATGTTTGCACTTGCAGAACAGGAAGAAATAGCGAAAGGCAAGGTCTTGGGAGAGACTTTAACATGGCAAGACATTTCAAAGATGAAATATACTTGGAGAGTAGCAATGGAAACTCTTAGAAAGTTTCCTCCTATTTTTGGTGGAATCAGAAAAGCAACAACAGATATTGAATACGGTGGATACATTATACCCAAAGGGTGGCAGATCTTTTGGGTCACATCAATGACTCACATGGACAACAAAATATTCCCAGAGCCATCAAAGTTTGATCCAAGTAGATTTGAAAATCAAGCATCTACGCCACCCTATTGCTATGTTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGTTACGAGTTTGCTAAGATTGAAACTCTTGTGGCAATTCATTACCTTGTGACAAAGTTCAGTTGGAAGCTACTTTCAGACAATTCCTTCAGCAGGGATCCAATGCCAACACCATCTCAAGGTCTATTGATTGAACTTTGCCCAAGGAAACTATCTTAG 1464 0.4078 MASVLLVALLLLIPIIFLLKRTKPSKRVPPGTLGIPIIGQSLGFLRAMRSNTAEKWIEDRINKYGPISKLNIFGKPTVLIHGQAANKFIFANSGNNIVNQQTKSTKMILGERNLLELSGKDHSRVRGALVSFLKPESLRHYVGKIDEEVRSHLQMHWEGKQQVKVLPLMKTLTFNIICSLLFGLESGKQRDQLMNPFRALIKGVWSVPINAPFTSYNRSLRESTRIQNLLKEIVRQKKVEHEKNGAKSRQDLISCLLSMVEDGKQVLTEKEIIHNAMLVMVAGHDTSAILITFIIRLLANDQDICAAVLQGREIYVFDYMFALAEQEEIAKGKVLGETLTWQDISKMKYTWRVAMETLRKFPPIFGGIRKATTDIEYGGYIIPKGWQIFWVTSMTHMDNKIFPEPSKFDPSRFENQASTPPYCYVPFGGGARICPGYEFAKIETLVAIHYLVTKFSWKLLSDNSFSRDPMPTPSQGLLIELCPRKLS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi580g00011 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Vivi580g00011 487 Gene3D Cytochrome P450 19 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 CDD CYP90-like 60 483 - -
Vivi580g00011 487 FunFam Taxadiene 5-alpha hydroxylase 19 484 - -
Vivi580g00011 487 SUPERFAMILY Cytochrome P450 24 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi580g00011 487 PANTHER CYTOCHROME P450 26 26 471 - -
Vivi580g00011 487 Pfam Cytochrome P450 29 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi580g00011 2 464 Cytochrome P450 AT5G45340 31.828 3.82e-70 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi580g00011 - - vvo:131633618 960.288