Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi580g00010 ATGGCAGAAATTGCACTCTCCATTGCAGCTAAGCTTGCAGAATATTTGGTCGACCCTATATTAAACAATGCTCGTTACGTATTCGGTTTCAACCAAATCGTTAGAAGTCTTCATGATCAAAAGGATGAGTTGATTGTAACCCAAAAGAGTGTGAAGAAGCGCATGAAAGAAGCCAGAAGGAAAACCGAAATAATTGAGGAAGCTGTCGAGAGGTGGATGAATGATGTTAATAATGTCTTAAAAGATGCAGAAAAGCTTGAAGAAAAAACTAAAGATAACAAAGGGTGTTACCGCGTACCTTTCCAATACTTTCTAGCAAAAGAAGTAGAGAATGTAACAAAGAGAATGAAGAATCTAAATAGCAGCTGCATATTTGAGCCATTTTCTAGGCGCACTGAACTTCCTGGCATGAAATACTTCTCATCCAAAAACTTTGTCTATTCCAAGTCCACTGAGCATTCTTATGATAAACTCATGGAGGCATTGAAAGATGGAAAATGTAACATGATTGGATTTCATGGGATGGGAGGATCTGGTAAAACCACTTTGGTGAAAGAGGTCGGGAAGAAAGCTGAGGAGTTGCAACATTTCGACAAAGTTGTTATGGCTGTTGTCTCTCACAATCCCGAAGTGACGAATATCCAAGGTCAAATTGCAGATAGTTTGGATTTGATATTGAGGGAAGAGACAACATTTGGTAGAGCACAAAGACTTTCAACAAGCTTACAAGCTGAGAGGCCTCTTGTGATCTTGGATGATGTGTGGGAGAAGCTTGATTTTGAAGCCATAGGGATTCCACCATGTTGCACTGTCTTGCTAGCTACTCGCGGTCGAGATGTATGCGTGTCTATGAACTGTCAAACAACGGTTGAACTGTCTCTCTTGGATGAAGAGGAAGCTTGGACTTTGTTTAAAAGGTGTGCAGATATCATTGATGACTCACCATATGCCTTGAAGTTGAAGAATGTGCCAAGGAAAATTGCTAAGAAATGCAAAGGACTCCCAATTGCAATTGTGACTATGGCAAGTATGTTAAGAGGGAAGAAAGTTGAAGAGTGGGAATTAGCATTGCTTAAACTAGAGGAATCAGAGGAAATTGATGTTGAAGAAGTGTTGAGTAGTTGTTATGCTTGTATCAAGTTAAGCTATGACAATTTGACAAAGCAAGTTTCAAAGAATCTCTTTTTGTTGTGCTCGATGTTTCCAGAAGATTATGAGATCAATATGGAAGATCTGGTTAGGTACATAAAGGGACTTGGACCATCTGCCGGGACTAGTGGACCAATGGAGAAAGTCAGAAGAGAGATACAAGTGACCATGAACATCCTTAAAGATTCACATTTATTGCAACCTTGTGGTAAACAAGAATTTGTGAAAATGCATGACTTGGTTCGGGATGCAGCCTTATGGATTGCTTCAAAAGAAGGCAAAGCGATTAAGGTACTGACCAAAACATCGGTAGCAGTAGAAGAAAATGTAAAAGAGATCGCTGCAATGTCCTTATGGGGCATGGAAAATCTTCCTCCTATTGATCAATTACAGTGTACAGCACTCAAGACTCTTCTACTTCATTCCACAGATGAATCTTCTATACAATTACCAAATGAATATTTTGGAAAGATGCAAATGCTGGAAGTCTTGGGGATAACAAAATTTTACTACACATGGCGCAATCTGTATATGCTGCGCTACTTGAGTTCATCATTGTCTATCTTTGCCGTGCCTCAATCAATAGAGAGATTAACTAGGCTACGGACTCTTTGTCTAAGAGGATATGATTTAGGCGATATCTCTATACTGGCAAGCTTAACAAGACTTGAGATTCTCGATTTGCGCAGTTCATCTTTCGATGAGCTGCCACAAGGAATCACAACTTTGCAGAAACTAAGACTACTGGATATCTACACTTGTCGCATCAAGAAGAACAACCCTTATGAAGTGATAAGGAAGTGTACACAGCTAGAGGAATTGTATATATGGAGAGTTGAAGATGATTCTTTACCGATTATCTCTTTACCAAGGTTACATAGATATGTAATTGTATGTGACAAGTCCAGGGAAAACTGTAGATTCCTCATAGATGCTTATCTAGAAGATCATGTGCCATCAAGAGCGTTATGCATAGACCGGTTTGATGCATCTGCTCTTATTCATGATTCATCTTCAATCAAAGATTTGTTTCTGAGATCGAAGCACCTTTACATGGGACATCTTCGGGGAGGATGCAAAAACATCGTGCCCCACATGGATCAAGGAGGGGGCATGAATGGGTTGATTGGACTAATACTTGAATCTTGTTCAGAGATAGAATGCCTCCTTGATACTACAAATACCAATTTGCCAGCATTCTTTGAGTTGGTTACGTTGAAGTTGATATGGATGAATGGTCTTAAACGTGTTTTCTATGATCCTACTTCCCAATGCTCTCTTGAAAAATTACAAGACCTGCAGATAGAGTATTGTACACAACTGAGTAGCATATCTTTTCCAAGGAATTCAAATATGTGTAATCTTAAGATTCTCAGATTACAGTGGTGTCCATTGCTAACATCATCACTTTTTGTACCTGCCATTGCTCGACGTTTAGTGCTACTAGAGGAATTAAAAATATTTGATTGCAGTAAGTTGAAGCATATCATAGCAGAAGAATATGAAGAAGACGAGAGTGCTAGTAATCCAAGTCCTACCTTGAAAGTGTTCCCAAATTTAAGGATTCTTCATGTGCACGGATGCCATAGTTTAGAATCAATCTTTCCAATCTCTTTTGCTCAAAGTCTGGAGAGATTAGAGAAGATAGTTATATGGTACAACTTTGGGTTAAATTATGTATTTGGCACACACGAATACAAGAATAGTGCGAATGAGATTAAGGCCAACGTCAATCTCATTGCTTTAAGAAGAATCTCACTTGTATCACTGTTGAATTTTATTGACATTTTCCCAAACTATTGTCATTCAAGGTCGCCAAATTTGAAAGAGATAGAATGCATAGAATGTCCTCGCTTATCAACCAACCTTATGTACAAGACTTTGCTCAGTTCAGATCAACAGAAATGTCTCACGGCCACTGAGGAGAGAGTGGTCTTTCCTGATAGCGAAGAACCTGTCCTAGCCTTGGAATATCTCACCTTTGAGAATTCCATGGTAGAAGGTATTTTCCAACTGCAAGCTGTAAAACAAGGGCCATTGAATTCAAACTTATCTCATTTATGTTTAAAGGATTTACCCAAGTTGAGTCTTATTTGGAAGGGTCCAAAAGATGTTCTCAACCTCCAGAAACTCAAGAGTTTGGTTCTGGTTGGATGTAGAAACTTGGAAACCATCTTCTCTCCTACTATTGTTGGAAGCCTAGCTGAGCTGAGTGAACTTGTTGTAAGCAAGTGTGAGAAGTTGAAGCAAATAGTTTGTTCAGATAATTCAATGCGCTTCCCTCTACTGTCCATTGTTCATGTCTTTCAGTGCAACAATTTGAACTTCCTTTTCTCTCAATCATTGCCTTCTCCATTTCGTGAACTAGAATTTATTACTATAGAGGAGTGTTATGAAATAGAACAGGTTTTCTTTTGCAATGAAGATGATAGAAGTCAACATGTGCCAGAAGAAAACAAACAGAATTTAGTACTTCCAAAATTGCGAGAGGTGAAACTCGTACGTTTGCCAAACATCACTGAATTTTCTAAAGGACCTTATAAACTGCAGCAAAATGTGGAACATTATACAGCGAGAAACTGTCCCAAATATACTTGTGCTTGGTTGCAGGAAAAGACTCCATTTTCAACCATACATTTACAAACAAAAGGGGATGTTTGTGAAATGGGATTAGGATTAGGCTCAGGCTCAACTAGTACTTTTTCCGCCACTACTGATATTAATCCTCAGATACAAGAGAGGGTTAGCAAGTTGGAAACAAATTTAGAATCGGAGAGACAGAGAAGAAGGTTGATGGAGTTAGATTTGCAGGTTGAGAGGGAAAGGCGAAAACTAATAGAACTGAAACTGGAAGCTGAGCAAGAAAGACGACGATTCATGGAAGAAACAATGCTTTCTTTCTTTCATAAAATGCTTGGAAGGGTCCCTCAACAGTTTGCTTACCTTCTTTCACAAACTCAATCGGCACAAAATGAAGAAAGTGAAGATCAGGACTTTCAAGATGTATCCATACAGTCCCTCTGA 4173 0.3892 MAEIALSIAAKLAEYLVDPILNNARYVFGFNQIVRSLHDQKDELIVTQKSVKKRMKEARRKTEIIEEAVERWMNDVNNVLKDAEKLEEKTKDNKGCYRVPFQYFLAKEVENVTKRMKNLNSSCIFEPFSRRTELPGMKYFSSKNFVYSKSTEHSYDKLMEALKDGKCNMIGFHGMGGSGKTTLVKEVGKKAEELQHFDKVVMAVVSHNPEVTNIQGQIADSLDLILREETTFGRAQRLSTSLQAERPLVILDDVWEKLDFEAIGIPPCCTVLLATRGRDVCVSMNCQTTVELSLLDEEEAWTLFKRCADIIDDSPYALKLKNVPRKIAKKCKGLPIAIVTMASMLRGKKVEEWELALLKLEESEEIDVEEVLSSCYACIKLSYDNLTKQVSKNLFLLCSMFPEDYEINMEDLVRYIKGLGPSAGTSGPMEKVRREIQVTMNILKDSHLLQPCGKQEFVKMHDLVRDAALWIASKEGKAIKVLTKTSVAVEENVKEIAAMSLWGMENLPPIDQLQCTALKTLLLHSTDESSIQLPNEYFGKMQMLEVLGITKFYYTWRNLYMLRYLSSSLSIFAVPQSIERLTRLRTLCLRGYDLGDISILASLTRLEILDLRSSSFDELPQGITTLQKLRLLDIYTCRIKKNNPYEVIRKCTQLEELYIWRVEDDSLPIISLPRLHRYVIVCDKSRENCRFLIDAYLEDHVPSRALCIDRFDASALIHDSSSIKDLFLRSKHLYMGHLRGGCKNIVPHMDQGGGMNGLIGLILESCSEIECLLDTTNTNLPAFFELVTLKLIWMNGLKRVFYDPTSQCSLEKLQDLQIEYCTQLSSISFPRNSNMCNLKILRLQWCPLLTSSLFVPAIARRLVLLEELKIFDCSKLKHIIAEEYEEDESASNPSPTLKVFPNLRILHVHGCHSLESIFPISFAQSLERLEKIVIWYNFGLNYVFGTHEYKNSANEIKANVNLIALRRISLVSLLNFIDIFPNYCHSRSPNLKEIECIECPRLSTNLMYKTLLSSDQQKCLTATEERVVFPDSEEPVLALEYLTFENSMVEGIFQLQAVKQGPLNSNLSHLCLKDLPKLSLIWKGPKDVLNLQKLKSLVLVGCRNLETIFSPTIVGSLAELSELVVSKCEKLKQIVCSDNSMRFPLLSIVHVFQCNNLNFLFSQSLPSPFRELEFITIEECYEIEQVFFCNEDDRSQHVPEENKQNLVLPKLREVKLVRLPNITEFSKGPYKLQQNVEHYTARNCPKYTCAWLQEKTPFSTIHLQTKGDVCEMGLGLGSGSTSTFSATTDINPQIQERVSKLETNLESERQRRRLMELDLQVERERRKLIELKLEAEQERRRFMEETMLSFFHKMLGRVPQQFAYLLSQTQSAQNEESEDQDFQDVSIQSL 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi580g00010 1390 Pfam NB-ARC domain 153 385 IPR002182 GO:0043531
Vivi580g00010 1390 Gene3D Ribonuclease Inhibitor 503 889 IPR032675 -
Vivi580g00010 1390 Gene3D Ribonuclease Inhibitor 890 1245 IPR032675 -
Vivi580g00010 1390 PRINTS Disease resistance protein signature 331 345 - -
Vivi580g00010 1390 PRINTS Disease resistance protein signature 601 617 - -
Vivi580g00010 1390 PRINTS Disease resistance protein signature 241 255 - -
Vivi580g00010 1390 PRINTS Disease resistance protein signature 169 184 - -
Vivi580g00010 1390 SUPERFAMILY L domain-like 459 1137 - -
Vivi580g00010 1390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 398 IPR027417 -
Vivi580g00010 1390 Coils Coil 1291 1346 - -
Vivi580g00010 1390 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1038 1206 - -
Vivi580g00010 1390 Coils Coil 55 93 - -
Vivi580g00010 1390 SUPERFAMILY RNI-like 961 1187 - -
Vivi580g00010 1390 Gene3D - 141 292 IPR027417 -
Vivi580g00010 1390 Gene3D - 294 381 IPR042197 -
Vivi580g00010 1390 Gene3D - 382 469 IPR036388 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi580g00010 155 480 WRKY Transcription Factor Family AT5G45050 27.920 1.29e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi580g00010 - - mtr:11431977 2251.48