Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi57g00110 ATGGCATCAATATCCTCATCTTCCTTTACTTATGCATGGAAATATGATGTGTTTCTAAGCTTCAGAGGCCAAGATACTCGGCACGGTTTTACTGGTTATCTGTACAAAGCACTGATTGATAGCGGAATTCACACCTTCATTGATGATGATGAACTTCAAAGAGGGGAACAGATTATGCCATCACTTGTCAAGGCAATTGCAGAGACAAGAATTGCTATTATTGTGTTCTCTAAGAACTATGCTTTTTCGTCCTTTTGTTTAGACGAACTCGTTAACATCCTCGCCTTAATTAAGGACAAGGGTCGGTTGGTTTTGCCGGTTTTCTATGACGTGGATCCTTCCGATGTTCGACATCAGAGAAGGAGTTATAAAGAAGCACTGGCTAAACATGAGGAAAGATTCCAAAATGACAAGGAGAAGGTGCAACAATGGAGGATAGCTTTGTGTCAAGCAGCTGATTTGTCTGGCTATCATTTCAAACATGGGAATGAGAATGAATATGAGTTTATAGAGAAGATTATTAAAGGGGTTTCCAGCATTATTAATCGCATTCCTTTACATATCGCGGATTATCCTGTTGGATTGAACTCTCGTGTGCTAAAAGTAACCTCGCTTTTAAATGTCGGATCAGACGAAGTCCACATGGTAGGGATTCACGGTATTGGTGGAATTGGTAAAACAACAATTGCTCGAGCTCTTTATAATATGATTGCCGATCAATTTGAAGGTTTGTGTTTTCTTGATAATGTAAGGGAGAATTCAGTTAAACACGGATTAGTACATCTCCAAGAAACACTTCTTTATGATATTATTGGGAAGAAGTATATGAAGTTGGGAAGTGTCAATGAAGGAATTCCAATAATAAAGCATAGGCTTCACCTAAAGAAGGTTCTTTTGGTTCTTGATGATGTCGACAAACCAGAGCAGTTGAGGGCAATAGTTGGAGAGACTAGTTGGTTTGGTCCTGGCAGCAGAGTAATCATTACCACTCGGGACAAGCATTTGTTAACGAGTCACGGGGTTGAAAAAACATATGAGGTAGATGGGTTGAATATGAAAGAAGCACTTGAATTGATTTGTTGGAATGCTTTTAAAACAGAAAAATTTGATTCAAGTTATAACAACGTTTTAAAACGTGCATTGAGCTATGCTTCTGGTCTTCCATTGGCTTTGGAGGTAATGGGTTCTTACTGTAGCGGGGAAAATCTGATGTCGAAGCCATGA 1224 0.3913 MASISSSSFTYAWKYDVFLSFRGQDTRHGFTGYLYKALIDSGIHTFIDDDELQRGEQIMPSLVKAIAETRIAIIVFSKNYAFSSFCLDELVNILALIKDKGRLVLPVFYDVDPSDVRHQRRSYKEALAKHEERFQNDKEKVQQWRIALCQAADLSGYHFKHGNENEYEFIEKIIKGVSSIINRIPLHIADYPVGLNSRVLKVTSLLNVGSDEVHMVGIHGIGGIGKTTIARALYNMIADQFEGLCFLDNVRENSVKHGLVHLQETLLYDIIGKKYMKLGSVNEGIPIIKHRLHLKKVLLVLDDVDKPEQLRAIVGETSWFGPGSRVIITTRDKHLLTSHGVEKTYEVDGLNMKEALELICWNAFKTEKFDSSYNNVLKRALSYASGLPLALEVMGSYCSGENLMSKP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi57g00110 407 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Vivi57g00110 407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 400 IPR027417 -
Vivi57g00110 407 SMART till_3 14 154 IPR000157 GO:0007165
Vivi57g00110 407 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 400 IPR044974 GO:0006952
Vivi57g00110 407 Coils Coil 120 147 - -
Vivi57g00110 407 Gene3D - 11 180 IPR035897 -
Vivi57g00110 407 Pfam NB-ARC domain 205 402 IPR002182 GO:0043531
Vivi57g00110 407 PRINTS Disease resistance protein signature 215 230 - -
Vivi57g00110 407 PRINTS Disease resistance protein signature 384 398 - -
Vivi57g00110 407 PRINTS Disease resistance protein signature 291 305 - -
Vivi57g00110 407 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 157 IPR035897 -
Vivi57g00110 407 Gene3D - 181 344 IPR027417 -
Vivi57g00110 407 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 183 - -
Vivi57g00110 407 Pfam TIR domain 14 177 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi57g00110 9 396 WRKY Transcription Factor Family AT4G12020 25.000 1.06e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi57g00110 - - gmx:121173697 536.569