Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi57g00080 ATGTTCCACTTTCTATTCTTAACCTTTCTCATCTTCACCGCCGTCGTCACCGCCGTCAACCCTGGCTCCACTCTCTCCGCTTCCGACACCAACCAATCATGGTCCTCCCCATCTTCCACTTTCTCCCTCCGCTTCGTCCCCGTCGATCCCCCAACCTCCCCTCCCACCTTCCTCGCCGCCATCGTCTACTCCGGCGGAGCTCCCACCGTCTGGACAGCCAGTAACTCCAACTCCAGCTCCATCCCCGTCGACTCCGCTGGTTCCCTCCAGTTCCTAACCAACGGCCTCCTCCGTCTCGTCAACGGTTCCGGCTCCACCGTCTGGGACTCCGGAACCGCCAACCGCAACGCAAAGTCAGCCTCAGTTGAAGAAAGTGGCAGATTGGTGATCTCGAATGGAACGGCTGATATTTGGTCTAGCTTTGATCATCTTACCGATACGCTTTTGCCTTCTCAGAATTTCAGTGTTGGTATGGCTTTGAAATCTGGTTCTTATTCGTTTAATTTATCCAACATTGGGAATATGAGTTTGTTTTGGAATAATAGTGTAGACTTTTGGACTCTAGGGTTGAATTCTACTGTGAAACAGAATTTGAGTTCACCTGTTTTGAGTTTAACATCTATTGGGATTCTGCAACTTTCTGATGTGAATTTTAGTACTCCTGTTGTTTTTGCTTATAGTAGTGACTATGCTGATGCTGGTAGTGGTGGGAGTGATGTTCTTAGGATTTTGAAATTGGATAGTGATGGGAATTTGAGGATTTATAGTACTTCTAGAGGTAGTTCGAATCCGATTGTTAGATGGTCTGCTGTTCAAGATCAGTGTCAGGTTTATGCTTACTGTGGGAACTATGGTATATGTAGTTATAATAATACGAATCCGATTTGTGGGTGTCCCTCGCGGAATTTTGAGATGGTTAGCGGTGTTAGGCAAGGGTGTAGGAGGAAAGTGAGCCTTGGTAGTTGTCGAGGGAATGAAACTATGTTGACGTTGGATCATACTCAGTTGTTGACTTATCCGCCTGATACTCAGTCGCAGGCGTTTTTTATTGGTATATCGGCGTGTAGAGGAAATTGTCTTTCGGGTTCGGGTGCTTGTTTTGCTTCTACTTCTATGTCGGATGGAACGGGACAGTGTTATATTAAGTCGGAGGATTTTGTGAGTGGTTATCAAAGTCCAGCGTTACCTAGTACTTCTTATGTCAAGGTTTGTCCGCCTTTGGATCCGAATCCACCGCCGTCTTCAGGGGAGACGGTGAAGGAAAAGAGTTCGAGAGTACAGGCGTGGATTGTTGTGGCTGTTGTTTTGGGAACTCTTTTAGGAGTGGTTGCTATTGAAGGTTGTTTTTGGTTTTGTTGTTGTAGAAAAACTTCAAGGTTTGGTGTATTGTCGGCTCAGTATGCTCTTCTTGAGTATGCTTCTGGTGCGCCGGTTCAGTTCACGTACAAGGAGCTTCAGCGCTCGACAAAAGGGTTCAAGGAGAAGCTTGGAGCGGGTGGATTTGGGGCAGTGTATAGAGGAGTTCTTGTTAACAAAACTGTAGTTGCGGTGAAACAGCTCGAAGGAATTGAACAAGGTGAGAAACAGTTTAGGATGGAAGTTGCAACTATAAGCAGTACTCATCATCTTAATTTGGTGAGACTTATTGGTTTTTGCTCGGAAGGGCGCCACCGGCTTTTAGTGTACGAGTTCATGAAAAACAGTTCACTGGATAATTTTTTGTTCTTGAAAGAAGAGCAATCGGGGAAACAGTTGAATTGGGAGTATCGGTTCAATATCGCGCTTGGCACTGCAAGAGGAATCACATACCTTCATGAGGAGTGCCGCGACTGCATAGTCCACTGTGATATCAAACCTGAAAACATTCTCTTGGACGATAATTACGTCGCCAAAGTCTCTGATTTCGGTCTTGCAAAGCTCGTGAATCCGAAAGACCATAGACACAGAACCTTGACAAGCGTGCGGGGAACAAGAGGATATTTAGCCCCTGAGTGGATTGCAAATCTTCCTGTAACATCTAAATCCGATGTTTACAGCTACGGCATGGTTTTGTTAGAGATTGTGAGCGGAAGGCGGAACTTTGATGTTTCCGATGAAACAAATCGGAAGAAGTTCTCTATTTGGGCCTATGAAGAGTTTGAGAAAGGCAACATCAAAGGGATTTTGGATAAAAGACTTGCAGATATAGAAATCGATATGGAGCAAGTTATGAGAGCGATCAAGGTATGCTTTTGGTGCATCCAAGAGCAACCGTCACAAAGACCTATGATGAGCAAAGTTGTTCAAATGCTAGAAGGTGTAAAAGAAATTGAGAAGCCACCTCCTCCTAAATTTGTTGCCGAAGGACCTGTTAGCGGAACCAGCACCTACATTAGTAGCAACGTTAGCGCGTTGTCCACAATTGGAGCCTCGCCAAATGTTCCTTCATCATCATCTTCAATTCAAACTAGTGGTGTTTCAAACTTTGCCTCGGGAAGAAACCCCGAGAAGGCAACTTCATCCCTTTTACAGTCAGACCTATGA 2523 0.4538 MFHFLFLTFLIFTAVVTAVNPGSTLSASDTNQSWSSPSSTFSLRFVPVDPPTSPPTFLAAIVYSGGAPTVWTASNSNSSSIPVDSAGSLQFLTNGLLRLVNGSGSTVWDSGTANRNAKSASVEESGRLVISNGTADIWSSFDHLTDTLLPSQNFSVGMALKSGSYSFNLSNIGNMSLFWNNSVDFWTLGLNSTVKQNLSSPVLSLTSIGILQLSDVNFSTPVVFAYSSDYADAGSGGSDVLRILKLDSDGNLRIYSTSRGSSNPIVRWSAVQDQCQVYAYCGNYGICSYNNTNPICGCPSRNFEMVSGVRQGCRRKVSLGSCRGNETMLTLDHTQLLTYPPDTQSQAFFIGISACRGNCLSGSGACFASTSMSDGTGQCYIKSEDFVSGYQSPALPSTSYVKVCPPLDPNPPPSSGETVKEKSSRVQAWIVVAVVLGTLLGVVAIEGCFWFCCCRKTSRFGVLSAQYALLEYASGAPVQFTYKELQRSTKGFKEKLGAGGFGAVYRGVLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNSSLDNFLFLKEEQSGKQLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDDNYVAKVSDFGLAKLVNPKDHRHRTLTSVRGTRGYLAPEWIANLPVTSKSDVYSYGMVLLEIVSGRRNFDVSDETNRKKFSIWAYEEFEKGNIKGILDKRLADIEIDMEQVMRAIKVCFWCIQEQPSQRPMMSKVVQMLEGVKEIEKPPPPKFVAEGPVSGTSTYISSNVSALSTIGASPNVPSSSSSIQTSGVSNFASGRNPEKATSSLLQSDL 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi57g00080 840 FunFam S-receptor-like serine/threonine-protein kinase 463 564 - -
Vivi57g00080 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 144 270 - -
Vivi57g00080 840 CDD STKc_IRAK 496 766 - -
Vivi57g00080 840 Gene3D Phosphorylase Kinase; domain 1 460 564 - -
Vivi57g00080 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Vivi57g00080 840 ProSiteProfiles Protein kinase domain profile. 490 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi57g00080 840 SUPERFAMILY Protein kinase-like (PK-like) 473 765 IPR011009 -
Vivi57g00080 840 Gene3D - 144 267 IPR036426 -
Vivi57g00080 840 SMART serkin_6 490 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi57g00080 840 PIRSF SRK 1 817 IPR024171 GO:0004674
Vivi57g00080 840 Pfam PAN-like domain 322 388 IPR003609 -
Vivi57g00080 840 Pfam Protein kinase domain 493 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi57g00080 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 565 774 - -
Vivi57g00080 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 190 IPR036426 -
Vivi57g00080 840 Pfam D-mannose binding lectin 70 156 IPR001480 -
Vivi57g00080 840 ProSiteProfiles Bulb-type lectin domain profile. 145 267 IPR001480 -
Vivi57g00080 840 MobiDBLite consensus disorder prediction 802 840 - -
Vivi57g00080 840 PANTHER OS07G0415500 PROTEIN 4 776 - -
Vivi57g00080 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 15 143 - -
Vivi57g00080 840 Gene3D Transferase(Phosphotransferase) domain 1 565 774 - -
Vivi57g00080 840 Pfam S-locus glycoprotein domain 239 299 IPR000858 GO:0048544
Vivi57g00080 840 Gene3D - 15 142 IPR036426 -
Vivi57g00080 840 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Vivi57g00080 840 SMART blect_4 22 144 IPR001480 -
Vivi57g00080 840 ProSiteProfiles Bulb-type lectin domain profile. 16 143 IPR001480 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi57g00080 429 774 Receptor kinase-like Gene Family AT5G20050 40.811 2.70e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi57g00080 Pkinase 1.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi57g00080 - - cam:101506838 1387.47