Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi57g00071 ATGGATAATCCTAACAATGACAGCTCTGGAATTTCATCTATTCAGTTAGAATCTGCTTCAAACAGAAAACCATCCCCTCTCCGTAAGATGGTAGCAGTTGCTTCCATTGCAGCCGGCATCCAGTTCGGTTGGGCCCTGCAGCTATCTCTATTAACACCATACATCCAGCTGCTTGGCGTCCCACATAAATGGGCCGCCAACATCTGGTTGTGCGGTCCAATTTCCGGCATGATCATCCAACCGATCGTTGGATATTACAGCGATCGGTTACGTTCTCGTTTTGGTCGCCGCCGTCCCTTCATCTTCTTTGGTGCAATCGCAGTCGCGATAGCAGTGTTCCTCATCGGCTACGCAGCTGATCTAGGCCACTCCTTGGGCGACGATCTCAAGAAAAAGACTCGACCGAAAGCTGTTGTCATCTTTGTCTTCGGTTTTTGGATACTAGACGTCGCTAATAACATGCTCCAAGGACCTTGTCGTGCCTTCATCGGCGACCTTGCTGCTGAAGACCATAAAAGAATGAGAACAGGTAACGCCCTGTTCTCATTTTTCATGGCCGTGGGAAATGTCCTTGGTTACGCGGCAGGCTCTTACCGTAAACTCTTCATGATGTTCCCTTTCACAAAAACCGAAGCCTGTAACGAGTTTTGCGCAAATCTTAAAACTTGTTTCTTTATCGCAATATTTCTTCTCATCGTACTTTCAGCCTTTGCTCTTCTTTACGTAGAAGACATCCCTTTACCATCACTAGAATCAAAATCGCAAACACAAACACAGACACAAACAGAACCAGAGCAACAAGTTTCATGTTCAGGAGAAATACTAGGTGCATTCAACGGACTACAAAAGCCGATGTGGATGTTAATGTTAGTGACAGCCATAAACTGGGTAGCATGGTTCCCATTTTTCTTGTTCGACACGGATTGGATGGGTCACGAAGTCTACGGCGGCAATCCCGGAGACGACGCATACAGCCGTGGAGTCCGTGCCGGAGCAATGGGGCTCATGATCAATGCTGTTGTGCTTGCTTTAATGTCGTTAGCAGTGGAGCCATTAGGGCGCTTTGTTGGGGGTGCAAAAAGACTCTGGGGGATTGTGAATATCATTCTTGCGGTTGGACTCGCCATGACTATAGTCATTACCAAGGCAGCTCAGCATGAACGCCGCGTCAGTGATGGTGATACGCCTTCTGCTGGGATTAAGGCTGCCTCGCTCGTTTTCTTCGCTGTCCTGGGAATTCCTCTTGCGATTAATTTCAGTGTTCCGTTTGCTTTAGCATCTATTTACTCCAGCGCAACAGGGGCTGGACAAGGTTTATCTTTGGGAGTTCTTAATATTGCAGTTGTCGTTCCACAAATGATAGTGTCGGCATTGAGTGGACCATGGGACTCTCTGTTTGGTGGAGGCAACTTGCCGGCGTTTGTGGTGGGTGTCGTGGCCGCCGTCATCAGTGGTGTATTAGCAATTATTGTTTTGCCTACCCCAAAGCCAACCGATGTGGCCAAGGCTTCATTTGCGGGTGGATTTCATTAG 1533 0.4801 MDNPNNDSSGISSIQLESASNRKPSPLRKMVAVASIAAGIQFGWALQLSLLTPYIQLLGVPHKWAANIWLCGPISGMIIQPIVGYYSDRLRSRFGRRRPFIFFGAIAVAIAVFLIGYAADLGHSLGDDLKKKTRPKAVVIFVFGFWILDVANNMLQGPCRAFIGDLAAEDHKRMRTGNALFSFFMAVGNVLGYAAGSYRKLFMMFPFTKTEACNEFCANLKTCFFIAIFLLIVLSAFALLYVEDIPLPSLESKSQTQTQTQTEPEQQVSCSGEILGAFNGLQKPMWMLMLVTAINWVAWFPFFLFDTDWMGHEVYGGNPGDDAYSRGVRAGAMGLMINAVVLALMSLAVEPLGRFVGGAKRLWGIVNIILAVGLAMTIVITKAAQHERRVSDGDTPSAGIKAASLVFFAVLGIPLAINFSVPFALASIYSSATGAGQGLSLGVLNIAVVVPQMIVSALSGPWDSLFGGGNLPAFVVGVVAAVISGVLAIIVLPTPKPTDVAKASFAGGFH 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi57g00071 510 SUPERFAMILY MFS general substrate transporter 28 497 IPR036259 -
Vivi57g00071 510 Gene3D MFS general substrate transporter like domains 23 492 IPR036259 -
Vivi57g00071 510 MobiDBLite consensus disorder prediction 1 20 - -
Vivi57g00071 510 CDD MFS_SLC45_SUC 30 489 - -
Vivi57g00071 510 PANTHER SUGAR TRANSPORTER 26 491 - -
Vivi57g00071 510 NCBIfam sucrose/proton symporter 26 496 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vivi57g00071 510 Pfam MFS/sugar transport protein 35 298 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi57g00071 8 510 Sucrose Transporter Gene Family AT1G22710 61.014 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi57g00071 K15378 - gmx:100782007 677.167