Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi57g00066 ATGGAAGAATTTTGGAACATGATTTGTGATGTTTCTGCTTGTTCTTCACTTGGAGGAAAGCCCTTGTGTTTCGATTTCGAGGTTCTGAAGGATCCTTCTTCATGCATCAGCCATTTGTTGATCATTTTGCTTGATATGTTGTTGCTAATAGTTTTCACATTTGTCATAATCCAAAAATGTTTCTTGAGGCCAATTCAGGGTCAGAATAGAGTGGAAAGATATTCAAAATTGCAGTTAGTTTCTGCAATAACCAGTGGCTGTCTCGGTTTGTTGCATTTGTGTTTTGGCATTTGGATTTTAGATGAGAAGTTAAGGAAAAATCTCACTGTTTTCCCTCTAAGTATGTTGCTGCTAGAACTGCTTCAGGGAATGACATGGATGTTAGTTGGTATAAGTACAAGTCTTTTGCTGAAACAACTTCCAAAAACATGGTTGAGATTGTTTTCTATTATGATATTCTTTGTTTCTGGTGTTTTGTGTGCTTTTTCCTTATCTTATGCATTGAGCAACAAAGAACTATCTCTTAAGGTAGCTTTAGATGTTTTATCTTTTTTCGGAGCATTTTTGCTGCTCTTTAGCACATACAAAGCATGTAAATATGAAGACACTGATGAGGAAGTTCATGGAAGTCTATATGCCCCTTTAAATAGTCAGGTCCATGGTGATGATCTCATTAGCCGTATAAGCGTAACCCCATTTGGAAGTGCTGGATTCTTTAGTAGAATGTCATTTTGGTGGTTGAATCCACTGATGAAAAAGGGTCAAGAGAAAATACTTCAGGACGAGGACATCCCAAAGTTGCGGGAAGCAGATAGAGCAGAAGTATGCTATTCGTTATTTATAGATCAATTGAATAGACAAAAGCAGAAGGACCCGTCATCACCATCGTCCATTTTATGGATAATAATTTCGTGCCACCGGAGAGAGATTTTAATATCAGGGTTCTTTGCATTTCTTAAGGTACTCACTGTATCGTCTTGTCCTGTAATTTTGAATGCCTTTATATTGGTGGCCGAGGGTAATAAAAGTTTCGAATATGAAGGTTACTTATTGGCCATCTCACTGTTATTTACAAAGATTTTAGAATCGTTATCTCAAAGGCAATGGTTTTTTCGTTCTAGACTAATTGGTATGAAAGTTAGATCCTTAATTACTGCAGCCATTTATAAGAAACAACTGAGATTATCCAATGCTACTAGATTGGTTCACTCTAGTGGCGAGATAATGAATTATATGAATGTGGATGCCTATAGAATCGGAGAATTTCCGTTTTGGTTTCACCAAACATGGACAACGGTTCTCCAACTATGTATCGCGTTGGTAATTCTTTTCCGTGCTATTGGACTAGCAACAATTGCGTCATTGGTGGTGATAGTTTTGACTGTGGTTTTAAATACTCCGTTAGCGAAGTTACAACATAAGTTTCTAAGCAAACTTCTGCTGGCTCAAGATGAAAGGTTGAAGGCTTGTTCAGAGGCTCTAGTGAATGTTAAAGTGTTGAAGTTATATGCATGGGAAATCCATTTTAAAAACGTCATTGAAAGTCTAAGAATTGTTGAACTAAAATGGTTGTCTTCGGTGCTTTTACAAAAGGCTTATGGTGTTATTCTCTTTTGGTTTTCACCTATTTTGGTCTCTACTGCTACCTTTGTGGCTTGTTACTTCATGGACATCCCTTTACATGCGAATAATGTTTTCACGTTTATCGCGACTTTGTGCCTTGTGCAAGATCCTATTTCAACCGTCGGAGATGTTGTTGGAGTGATCATTCAAGCAAAGATTTCCTTTTCTCGGGTTGTGATATTTCTCGAGGCACCTGAGCTAAATACTACAGTTGTCAGAAAGAGGTGCTATGATGAGAAGTTGAAGGGCTCAATTTTAATCGAGTCTGCAGACTTTTCATGGGAAGATGATTTATTGAAGCCAACAATAACAAATATAAACTTGAATGTCAATGTTGGGAAAAAGATAGCTATTTGCGGAGAAGTTGGTTCAGGAAAATCAACCTTATTAGCAGCGATTCTCGGAGAAGTACCGAATACTAAAGGGAAAATCGAAGTTTATGGAAAGTTTGCATATGTTTCTCAAACAGCATGGATACAAAAAGGAACAATACAAGAAAACATTTTGTTTGGATCCCCTTTGGATGCTAAAAGGTATCAAGAATCGCTTCGTAGGTCATCACTCATGAAGGACCTTGAGTTGTTTCCATTTGGTGATCTAACTGAGATAGGAGAGAGAGGTGTTAATCTAAGTGGAGGCCAAAAGCAGCGAATTCAACTTGCTCGGGCTCTTTATCAGAATGCTGATGTATATCTCTTGGATGATCCTTTTAGTGCTGTTGATGCGCACACTGCAAAAAATTTGTTCCATGATTACATATTGGAAGGACTTGCTGAAAAGACGGTACTTCTTGTAACTCATCAAGTTGACTATCTCCCTGCATTTGATTCTATCTTGTTGATGTTAGACGGGAAAATCCAACAAGCGGGTACTTATAATGATCTACTAGCCTTTAGCCAAGAATTTAAGGACCTTGTTAACGCACACAAAAAGACGGGTGGTTCTTGCCAGCTTGCAGATGTTACTTCATCCCCAATACATTCAAAGTCTAATAACGAGATGAAACAATATTTCACAAAGAAGAACCTTAATGCTATAAATGGTGATGAGTTTATCAAGGAAGAAGAAAGAGAAATGGGAGACACGGGGTTGAAGCCTTACATACAATATCTCAATCAGAAAAGAGGCTATATATACTTCTTTGTCAGTTCTCTTTCTCACTTCATGTTTATGATTTGTCAGATACTCCAAAACTCGTGGATGGCTTCTAGTGTTGACGATCCTCAAGTCAGCACATTGAAATTGATTACAATTTACCTATTGATTGGAATTACTTCTACAATTTTCGTCACAATGAGAAGTCTATTTGCAGCTGCATTGGGTTTTCAATCATCAAAAAACTTATTTAGACAGTTAATAAATTCTCTTTTTGGCGCATCAATGTCTTTCTATGACACTACGCCTTTAGGAAGGATACTAAGTAGGGTCTCATCAGATATGAGCATTGTGGATCTCGATATCGCTTTTAACTTCACATCTTATGTCGCATCCACTATGAATCATTACGCAAATATACTAGTTTTATCATCTGTCGCTTGGCAAGTCTTGCTTTTGTGTATACCAATGGCTTATGCTACTATTCGGTTACAGAGACACTACTATGCATGTGCTAAAGAACTTATGCGGATGAACGGAACAACAAAATCTTCTGTAGCTAATCATGTAGCTGAAACTTACGCTGGAGCTATGACAATAAGGGCCTTTGAGGAGGAGAATCGTTTCGTACACAAGAATCTTGATTTAATTGATGATAATGCAAGTGCATCCTTCCACAGTTTTGCCTCAAATGAGTGGTTGATTCAACGATTAGAAGTAATCTATGCAGTTGTTCTCGCCTCTGCAGCACTTTGCATCGCTATGCTTCCTTTAGGGACTTTTACATCAGGTTTTATTGGTATGGTCCTCTCTTATGGCCTTTTATTAAACACTTCTTTAGTATACTCCACTCAACACCAATGCATCCTAGCGAATTATATAGTATCGGTAGAGAGGATAAATCAATACACTCACATACAAAGTGATAATCAAGAAGTGATAGAAGGAAATCATCCTCCAGATAACTGGCCAGATGCAGGAAAGGTTGAAATAAAAGACTTGAAGATACAATACAAGTCTGATGGACCATTTGTACTTCATGGTATCACATGCACATTTGAAGGAGGCCACAAGATTGGCATTGTTGGTAGAACAGGTAGCGGAAAATCAACTCTCATAGGTGCTTTGTTTCGTCTTGTGGAGCCGGCAAGAGGAAAAATTTTAGTTGATGGAATAGACATATCATCTATTGGCCTTCATTACTTGAGGTCATGTTTTAGTATTATACCTCAGGATCCCACCTTATTCATTGGGACAGTTAGATATAACTTGGATCCTTTATTTCAACATTCCGATCAAGAAATATGGGAGGTTCTTCGAAAATGCCAACTGCAAGAGGTTGTCGAAGATAAAGGCGGCTTAGATTCCTCGGTTGTGGAAAATGGAACAAATTGGAGCATTGGACAAAGGCAACTATTCTCTTTGGGGCGTGCGCTTTTGAGGAAAAGTAGGATATTGGTGTTAGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTTCAGAATACCATTAGGACCGAATTTGATGGTTGTACAGTCATAACAGTAGCACACAAAATACCAACTGTGATGGATTGCGATATGATCCTTGCCATAAGTGATGGAAAGTTGATCGAGTACGATGAACCATTGAAGTTGATGAAGAGAGAACAATCCATGTTTGGAAACCTTGTAAGGGAATATTGGTCTCATTTTCAATTTGCAGAATCACATTGA 4443 0.3795 MEEFWNMICDVSACSSLGGKPLCFDFEVLKDPSSCISHLLIILLDMLLLIVFTFVIIQKCFLRPIQGQNRVERYSKLQLVSAITSGCLGLLHLCFGIWILDEKLRKNLTVFPLSMLLLELLQGMTWMLVGISTSLLLKQLPKTWLRLFSIMIFFVSGVLCAFSLSYALSNKELSLKVALDVLSFFGAFLLLFSTYKACKYEDTDEEVHGSLYAPLNSQVHGDDLISRISVTPFGSAGFFSRMSFWWLNPLMKKGQEKILQDEDIPKLREADRAEVCYSLFIDQLNRQKQKDPSSPSSILWIIISCHRREILISGFFAFLKVLTVSSCPVILNAFILVAEGNKSFEYEGYLLAISLLFTKILESLSQRQWFFRSRLIGMKVRSLITAAIYKKQLRLSNATRLVHSSGEIMNYMNVDAYRIGEFPFWFHQTWTTVLQLCIALVILFRAIGLATIASLVVIVLTVVLNTPLAKLQHKFLSKLLLAQDERLKACSEALVNVKVLKLYAWEIHFKNVIESLRIVELKWLSSVLLQKAYGVILFWFSPILVSTATFVACYFMDIPLHANNVFTFIATLCLVQDPISTVGDVVGVIIQAKISFSRVVIFLEAPELNTTVVRKRCYDEKLKGSILIESADFSWEDDLLKPTITNINLNVNVGKKIAICGEVGSGKSTLLAAILGEVPNTKGKIEVYGKFAYVSQTAWIQKGTIQENILFGSPLDAKRYQESLRRSSLMKDLELFPFGDLTEIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTAKNLFHDYILEGLAEKTVLLVTHQVDYLPAFDSILLMLDGKIQQAGTYNDLLAFSQEFKDLVNAHKKTGGSCQLADVTSSPIHSKSNNEMKQYFTKKNLNAINGDEFIKEEEREMGDTGLKPYIQYLNQKRGYIYFFVSSLSHFMFMICQILQNSWMASSVDDPQVSTLKLITIYLLIGITSTIFVTMRSLFAAALGFQSSKNLFRQLINSLFGASMSFYDTTPLGRILSRVSSDMSIVDLDIAFNFTSYVASTMNHYANILVLSSVAWQVLLLCIPMAYATIRLQRHYYACAKELMRMNGTTKSSVANHVAETYAGAMTIRAFEEENRFVHKNLDLIDDNASASFHSFASNEWLIQRLEVIYAVVLASAALCIAMLPLGTFTSGFIGMVLSYGLLLNTSLVYSTQHQCILANYIVSVERINQYTHIQSDNQEVIEGNHPPDNWPDAGKVEIKDLKIQYKSDGPFVLHGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPARGKILVDGIDISSIGLHYLRSCFSIIPQDPTLFIGTVRYNLDPLFQHSDQEIWEVLRKCQLQEVVEDKGGLDSSVVENGTNWSIGQRQLFSLGRALLRKSRILVLDEATASIDNATDLILQNTIRTEFDGCTVITVAHKIPTVMDCDMILAISDGKLIEYDEPLKLMKREQSMFGNLVREYWSHFQFAESH 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi57g00066 1480 FunFam ABC transporter C family member 5 612 857 - -
Vivi57g00066 1480 Pfam ABC transporter 1252 1399 IPR003439 GO:0005524
Vivi57g00066 1480 Gene3D ABC transporter type 1, transmembrane domain 885 1216 IPR036640 GO:0005524|GO:0016020
Vivi57g00066 1480 Gene3D ABC transporter type 1, transmembrane domain 282 604 IPR036640 GO:0005524|GO:0016020
Vivi57g00066 1480 ProSitePatterns ABC transporters family signature. 751 765 IPR017871 GO:0005524|GO:0016887
Vivi57g00066 1480 CDD ABCC_MRP_domain1 626 826 - -
Vivi57g00066 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1235 1468 IPR003439 GO:0005524
Vivi57g00066 1480 SUPERFAMILY ABC transporter transmembrane region 912 1216 IPR036640 GO:0005524|GO:0016020
Vivi57g00066 1480 CDD ABCC_MRP_domain2 1233 1452 - -
Vivi57g00066 1480 FunFam ABC transporter C family member 5 885 1216 - -
Vivi57g00066 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 628 849 IPR003439 GO:0005524
Vivi57g00066 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi57g00066 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1464 IPR027417 -
Vivi57g00066 1480 SUPERFAMILY ABC transporter transmembrane region 299 604 IPR036640 GO:0005524|GO:0016020
Vivi57g00066 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 849 IPR027417 -
Vivi57g00066 1480 SMART AAA_5 653 832 IPR003593 GO:0016887
Vivi57g00066 1480 SMART AAA_5 1261 1453 IPR003593 GO:0016887
Vivi57g00066 1480 FunFam ABC transporter C family member 3 1218 1469 - -
Vivi57g00066 1480 Gene3D - 605 862 IPR027417 -
Vivi57g00066 1480 CDD ABC_6TM_ABCC_D1 312 599 IPR044746 GO:0140359
Vivi57g00066 1480 Gene3D - 1218 1468 IPR027417 -
Vivi57g00066 1480 Pfam ABC transporter transmembrane region 311 570 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi57g00066 1480 Pfam ABC transporter transmembrane region 919 1183 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi57g00066 1480 CDD ABC_6TM_ABCC_D2 917 1210 IPR044726 GO:0140359
Vivi57g00066 1480 Pfam ABC transporter 645 778 IPR003439 GO:0005524
Vivi57g00066 1480 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 235 1467 - -
Vivi57g00066 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 933 1198 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi57g00066 1480 FunFam ABC transporter C family member 10 294 607 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi57g00066 603 837 Calmodulin-binding Proteins AT2G36910 29.762 9.84e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi57g00066 K05666 - gmx:100811468 2070.43