Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi57g00048 ATGTCAAGTGAAGTAGTGAAGAAAGAAGGGTCTCTAAATCTGAAAATCACTAGCAAAAGCTATGTGAAGCCAGATGAAAAAATAGGGAAAAAACAGTATCAATTGGTCACATTTGACCTACCCTACTTGGCTTTTTACTATAACCAAAAATTGATTTTTTACAAAGGAGGTAACTTTGAGGAGAATGTTGAGAAGCTGAAAAATGGGCTTGGTGTTGTTTTGAAGGAGTTTCATCAACTTGCTGGAAGAATAGGAAAAGATGAAGAGGGTGTTTTCTTGGTTGAATATGATGATGATATGGAGGGTGTTGAAGTTGTTGAAACCGTTGCTAATGAGGTTAGTGTTGAAGATCTAACCGTTGCTGAAAGTAATGCTAGTTTGAAGGAATTGATTCCTTATGGTGGAATCTGTAATTTGGAAGGCATGCATAGACCTTTGTTGGCTGTTCAGTTGACAAAGCTCAAAGATGGGCTCGCCATGGGCTTGGCTTTTAACCATGCTGTCCTTGATGGAACTTCCACTTGGCACTTCATGACTTCATGGGCCGAGATATGCAGCGGTACACCCTCCACAACAGCCCAACCATTTTTGGATCGGACCAAGGCCCGAAACACACGCGTGAAGCTTGATCTCTCTCTACCTGAGCCCAAAGCTCCACCACCATCGACTAATGGTGAGGCAAAGCCAGAGAGCGAAGGTGTTCCACCATTAGCCAATGGTGGGGCAAAGCTCGAGCCTGTATTAAGAGAAAAGATCTTCAAATTCTCTGAATCAGCTATCGACAAGATTAAGTCAACAGTGAATGAAAACCTTCCATCCGACGGTTCAAAACCATTCTCAACATTCCAAGCTCTCTCCACTCATATTTGGCGCCACGTGACTTTAGCACGTGACCTAAAACCCGAAGATTACACAGTTTTCACTGTTTTCGTGGATTGTAGAAAACGAGTGGATCCACCAATGCCAGAGGCCTACTTCGGAAACCTAATTCAAGCCATATTCACGGTCACGGCCGCGGGACTTTTGTCGGCCCACCCGCCACAATTCGGTGCATCCTTGATCCAAAAGGCAATCGAAGCCCATGACGCCAATGCTATCGACCGACGTAACAAAGAGTGGGAGAGTTCACCCAAGATATTTGAATTCAAAGATGCTGGAATCAATTGTGTGGCAGTTGGAAGTTCACCAAGGTTTAAGGTTTATGACATTGATTTTGGATGGGGGAGGCCAGAGAATGTGAGAAGTGGAACTAATAACAAATTCAATGGAATGATATATTTGTATCCGGGGAAGAGTGGAGGGAGAAGCATTGATGTTGAACTAACATTGGAGCCTGAGGCAATGGGAAAGTTGGAGCAAGATAAGGAATTTCTTATGGAGAATATAATATAA 1392 0.4332 MSSEVVKKEGSLNLKITSKSYVKPDEKIGKKQYQLVTFDLPYLAFYYNQKLIFYKGGNFEENVEKLKNGLGVVLKEFHQLAGRIGKDEEGVFLVEYDDDMEGVEVVETVANEVSVEDLTVAESNASLKELIPYGGICNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTSTWHFMTSWAEICSGTPSTTAQPFLDRTKARNTRVKLDLSLPEPKAPPPSTNGEAKPESEGVPPLANGGAKLEPVLREKIFKFSESAIDKIKSTVNENLPSDGSKPFSTFQALSTHIWRHVTLARDLKPEDYTVFTVFVDCRKRVDPPMPEAYFGNLIQAIFTVTAAGLLSAHPPQFGASLIQKAIEAHDANAIDRRNKEWESSPKIFEFKDAGINCVAVGSSPRFKVYDIDFGWGRPENVRSGTNNKFNGMIYLYPGKSGGRSIDVELTLEPEAMGKLEQDKEFLMENII 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi57g00048 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 458 - -
Vivi57g00048 463 Pfam Transferase family 14 457 - -
Vivi57g00048 463 Gene3D - 238 454 IPR023213 -
Vivi57g00048 463 FunFam Tryptamine hydroxycinnamoyl transferase 236 455 - -
Vivi57g00048 463 MobiDBLite consensus disorder prediction 210 240 - -
Vivi57g00048 463 Gene3D - 11 212 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi57g00048 46 460 Monolignol Biosynthesis Gene Families AT5G48930 26.807 5.81e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi57g00048 K19747 - gmx:100790669 763.066