Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi577g00003 ATGACCACCAACAACCCCCGTGAAAATTTGTTGATGTCAACACCATCATCAAAATCACCATCCTCCGGAGCATTTTTCAATGGTCCTAGTGAACAAAAGGAGGATCTGGCTGCAATGCCCTTTAAGAGATGTAAGGGTAGACCACGGGGCTCCAAGAACAAACCCAAGTCCTATATTGAGATTGAAGAAGAACCCGATAACATCATGAAATGGGTTGTCATCAAAATCCCTACTGGAGACGATATAGTGCAGTCTCTCATCAATGTTGCTTTGCATCATCGAGCTAACATCACTATCCTAGGAGGTTTCGGTCTTGTATCTGATGTTACACTTCATAATTCAGTGTCCCAAGTCCCTCCGTTAACAATATCAGGATCCTCTCAAATGGTATCTATCAGTGGAACTTATTTCAATACCTATAATGGAGTTTTCATTGAACCTTTTCATTCTTCTTTTTCCATTTTCCTTGCTGGTGATCGCGGGGAAGTGTTTGGTGGGACTGTTGTAGGCAAACTTAAGGCTGCAGCTGATATTTTAATCACAGCCACTCTTTCAAAGAAGCCTGAGTTTTATAAAGGAGACACCATAAATGAAAGTATTCAAGAAGTTGAACAAGATGGACACAAAAACACTCCATTTATGTCTAGTAATGGTGTTACGGAAACAAATTCAAACCACCCAAATTATCAATTCCTTGCTCCTCCTCCAGGTTTTGAGGATGTCAAGCCGTGGAACCATTGCATTCATACTAATAATTACTAG 762 0.4055 MTTNNPRENLLMSTPSSKSPSSGAFFNGPSEQKEDLAAMPFKRCKGRPRGSKNKPKSYIEIEEEPDNIMKWVVIKIPTGDDIVQSLINVALHHRANITILGGFGLVSDVTLHNSVSQVPPLTISGSSQMVSISGTYFNTYNGVFIEPFHSSFSIFLAGDRGEVFGGTVVGKLKAAADILITATLSKKPEFYKGDTINESIQEVEQDGHKNTPFMSSNGVTETNSNHPNYQFLAPPPGFEDVKPWNHCIHTNNY 253
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi577g00003 253 CDD DUF296 73 181 IPR005175 -
Vivi577g00003 253 ProSiteProfiles PPC domain profile profile. 66 204 IPR005175 -
Vivi577g00003 253 MobiDBLite consensus disorder prediction 1 33 - -
Vivi577g00003 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 67 182 - -
Vivi577g00003 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 182 IPR005175 -
Vivi577g00003 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 217 IPR014476 GO:0003680
Vivi577g00003 253 MobiDBLite consensus disorder prediction 1 28 - -
Vivi577g00003 253 Gene3D - 70 194 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi577g00003 43 218 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 33.333 1.62e-20 85.1