Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi576g00006 ATGTATGTGATGGCTTTAACAGAAATTGCCCGCGATGTGAAGGTCTGGAAGGCATTTGCCATGGAGGCTTCTCATTCTAATGGTTATTCTGATTTTGGAAGAATGCTTTTAAAGATACACAATAGCATCCTGGGGCAATACATAAGAGCTGACTGGTTACAGTATTCTTCTCACTCTTGGGTTGAACGATGTCAGAGTACAAATAGTGCGGAATCGGTAGAACTGCTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGATGTCAACAATCTCTGGGACTCACCAGCGCAACCAATATTAGGTTCTGAATGGAAAACCTGGAAGCATGATGTAACGAAATGGTTTTCAGCATCACCTTCCTTGTCTAGCAGCAAAGACACTCCTAAACAGATTTCTGTTGATCCATACCAAACAAACCTGCAGGCTTCTAGAAAAAGGCCTAAACTTGAAGTTCGTCGTGCAGATACACATGCTTCAAAAGTGGAGTTCAAGGGTTCAGATCACACTATTGCTCTTGTGAATGACCCTGGTTTCTTTAAGAATCAGGAGACATTGAGCACATTGACACCTGAGGCTTTTAAACATGAAAATATTCGAAACGTATCTATCCCAAATGATATGTCCAGTAATTTGACCAACAATTGGAATGAAATTGTAGTTGAGGCTGCTGATTCTGGTTTCTTGCATGCCAAAGAAATTGAATCAACACCTATAAATGAAATGGTTGCTGTAAACTCTGTGGATCCTGGTAGTAAGAATCGACAATGTATAGCTTTCATTGAAGCCAAAGGAAGACAGTGTGTGAGATGGGCAAATGAGGGAGATGTATACTGTTGTGTGCACTTATCCTCTCGTTTTTTGGCCGGCTCAGCAAACGCCGAAAACCCGGGTCAAACTGATACTCCTATGTGTGATGGTACAACTGTTGTGGGTACTAAATGTAAGCATCGGGCTCTACCTGGATCATTATACTGTAAGAAACATCGGCCTAATGCTGAAACAGAACAGGTCTCATGGTTACCCCAAAGTACTATAAAGAAGAAACATGAAGAAAGTTATACTGGTTCAGAGAACATGTTCTGTAAAGACATAGTATTGGTAAAGGCCGAAGGTTCACTGCAAGTGGATCCAGCTCCATCCATTGCTGGTGATTCATTACATGGAGAAAACAACTTGTCTGAGAAGCCAATGCATTATGTTGCACCGGAGGCTCCGATCTGTATAGGGTCTCCTCCATTTGATAATACAAATCCTTGTAGGGAAGCTCCTAAGCGCTATTCCTTATACTGTGAAATCCACCTTCCAAGTTGGCTTAAACGAGCAAGAAATGGGAAGAGTAGAATAGTATCAAAAGAAGTGTTCTCAGACCTTTTGAGGGGTTGCAGCTCATGGGAGCAAAAGATACATCTGCATGAAGCCTGCGAGCTTTTTTATAGGCTATTCAAAAGCATTTTATCACTAAGAAACCAAGTCCCTAAGGATGTCCAATTCCAATGGGCTTTGACCGAAGCCTCTAAAGAATTTGGTGTTGGGGAATTTTTTACTAAGTTGGTTCTTAGTGAAAAAGAGAGAATCAAATCAATGTGGGGATTCAATGATGACATGAATGTATCATCTGTAATAGCAGAAGAACAACAACCACCACTCTTGCTCTTGCCACCCACAATTAATCAGAGCTGTGATGATGAAAATGCCATTAAATGTAAGATATGTTCAACACAATTTCCTGATGACCAAACACTCGGTAACCATTGGATGGACAGTCATAAAAAGGAAGCGCAGTGGCTGTTTAGAGGCTATGCATGTGCCATCTGTCTGGATTCTTTTACTAATAAGAAACTATTGGAAACCCATGTTCAAGAGAGACATCATGTGCAGTTTGTCGAACAGTGTATGCTTCTCCAGTGCATTCCTTGTGGGAGTCATTTTGGAAATTCTGAACAATTATGGCAGCATGTTTTATCATCTCACCATGTTGATTTTAAGCCATCTAAAGCTCCGGAGCAGCAAACTTTCTCTACTGGCGAAGGTTCACGGGTAAAACATGACCAGGGAAATTCGGCTGCTTTGGAAAATAATTCCGAGAATCCAGGTGGTCCACGGAGGTTTATTTGCAGGTTTTGTGGGTTGAAATTTGATTTACTACCTGACCTAGGACGACATCATCAAGCTGCTCATATGGCGCCCAATCTGGTTAGCAACCGTCCCGCTAAGAGGGGGGTTCGCTATTATGCATATAAATTAAAAACTGGCAGGCTAAGCCGCCCTAGATTTAAAAAAAGTTTGGCAGCCGCGGCCTCATTAAGGATGAGAAATAAAGCTAATGCTAATTTAAAGCGATGCATTCAGGCAACAAAGTCAATCGGTGTGGAAGAAACAACCGTGCAACCTCATATAACAGAAACAACAAATATCAGTGGATTGACAGAACATCAATGTTCAGCTGTTGCCAAAATTTTGTTTTCAGAAATTCAGAAAACTAAACCTCGGCCTAACAATCTTGATATTTTATCAGTTGCTCGCACTGCTTGCTGCAAAGTTCATCTAGTAGCATCACTGGAAGAGAAATTTGGAGCTCTACCTGAAAGGCTCTATTTAAAGGCAGCAAAACTTTGCAGTGAGCGTAATATTGTTGCGAAATGGCACCATGAGGGATTTGCTTGTCCCCGAGGTTGCAACTTGTCAAAGGATCAAGGCTCACTATCTCCTTTAGAAACTCTTCCAAATGGTTTCGTAATGTCAAAATCTGTAAATTTGTCTGATCCTACGGGTGATGAGTGGGATGTTGACGAGTTTCACTGCATAATCGATGCACAAAGTTTACAATTAGGTTCACGGAAAAGGGCTACTGTATTGTGCGATGACATTAGCTTTGGGAAGGAGTCAGTTCCAGTTATTTGTGTAGTAGATCAAGAATTTCTACATTCTCTAAATGAGCAAGGGTTTAATGAACAAGATGTAATCTCTTCTAAACCTTGGGAGAGTTTTTCCTATGTTACGAAGCCAATAATTGATCAATCCCTAAGTCTTGGTTCAGAGAGTCCACAATTGGGATGTGCCTGCTCATATTCTACCTGCGGTCCTGAAACATGTGATCACGTATACCTATTTGGTAATGACTATGCTGACGCAAAAGACATAGCTGGGAAACCAATGCGAGGCAGATTCCCATATGATGCAAATGGTCGAATAATATTGGAGGAAGGTTATCTTGTCTATGAGTGTAACCATATGTGCAGATGCAACAAATTCTGTCCAAACAGAATACTACAGAACGGAGTACGAGTCAAATTGGAAGTCTTCAAAACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGAGAAACTATTCTACGCGGTACATTTGTGTGTGAGTACATAGGAGAGGTTTTGGATGTGCAGGAGGCACACCGCAGGCGCGAAAGATATGGCGAAGGGAATAGCAGTTATTTCTACGACATCAGTGCTCGAGTTAATGATATGAGCAGATTGATGGAAGAACATGTTCAATATGTGGTTGATGCTACTAAATATGGAAATGTGTCGAGGTTCATCAATCATAGCTGCTCACCGAATCTTGTGAGTCACCAAGTTCTTATAGAGAGCATGGAATGTGAGCGTTCACACATTGGTTTTTATGCAAGTCGAGATATTTCTGTAGGCGAAGAGCTGACATATGGCTTTCAGTATGAGCTTGTACCCGGTGAAGGATCTCTCTGTCTTTGCGGATCATCAAATTGTAGAGAACGACTTTACTAG 3759 0.4137 MYVMALTEIARDVKVWKAFAMEASHSNGYSDFGRMLLKIHNSILGQYIRADWLQYSSHSWVERCQSTNSAESVELLKEELFDSILWNDVNNLWDSPAQPILGSEWKTWKHDVTKWFSASPSLSSSKDTPKQISVDPYQTNLQASRKRPKLEVRRADTHASKVEFKGSDHTIALVNDPGFFKNQETLSTLTPEAFKHENIRNVSIPNDMSSNLTNNWNEIVVEAADSGFLHAKEIESTPINEMVAVNSVDPGSKNRQCIAFIEAKGRQCVRWANEGDVYCCVHLSSRFLAGSANAENPGQTDTPMCDGTTVVGTKCKHRALPGSLYCKKHRPNAETEQVSWLPQSTIKKKHEESYTGSENMFCKDIVLVKAEGSLQVDPAPSIAGDSLHGENNLSEKPMHYVAPEAPICIGSPPFDNTNPCREAPKRYSLYCEIHLPSWLKRARNGKSRIVSKEVFSDLLRGCSSWEQKIHLHEACELFYRLFKSILSLRNQVPKDVQFQWALTEASKEFGVGEFFTKLVLSEKERIKSMWGFNDDMNVSSVIAEEQQPPLLLLPPTINQSCDDENAIKCKICSTQFPDDQTLGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNSEQLWQHVLSSHHVDFKPSKAPEQQTFSTGEGSRVKHDQGNSAALENNSENPGGPRRFICRFCGLKFDLLPDLGRHHQAAHMAPNLVSNRPAKRGVRYYAYKLKTGRLSRPRFKKSLAAAASLRMRNKANANLKRCIQATKSIGVEETTVQPHITETTNISGLTEHQCSAVAKILFSEIQKTKPRPNNLDILSVARTACCKVHLVASLEEKFGALPERLYLKAAKLCSERNIVAKWHHEGFACPRGCNLSKDQGSLSPLETLPNGFVMSKSVNLSDPTGDEWDVDEFHCIIDAQSLQLGSRKRATVLCDDISFGKESVPVICVVDQEFLHSLNEQGFNEQDVISSKPWESFSYVTKPIIDQSLSLGSESPQLGCACSYSTCGPETCDHVYLFGNDYADAKDIAGKPMRGRFPYDANGRIILEEGYLVYECNHMCRCNKFCPNRILQNGVRVKLEVFKTEKKGWAVRAGETILRGTFVCEYIGEVLDVQEAHRRRERYGEGNSSYFYDISARVNDMSRLMEEHVQYVVDATKYGNVSRFINHSCSPNLVSHQVLIESMECERSHIGFYASRDISVGEELTYGFQYELVPGEGSLCLCGSSNCRERLY 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi576g00006 1252 MobiDBLite consensus disorder prediction 664 697 - -
Vivi576g00006 1252 ProSiteProfiles Pre-SET domain profile. 1018 1094 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi576g00006 1252 Pfam Zinc finger C2H2-type, 3 repeats 603 728 IPR040689 -
Vivi576g00006 1252 Pfam Pre-SET motif 957 1089 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi576g00006 1252 ProSiteProfiles Zinc finger C2H2 type domain profile. 704 732 IPR013087 -
Vivi576g00006 1252 ProSiteProfiles Post-SET domain profile. 1236 1252 IPR003616 -
Vivi576g00006 1252 SMART c2h2final6 704 727 IPR013087 -
Vivi576g00006 1252 SMART c2h2final6 601 624 IPR013087 -
Vivi576g00006 1252 SMART c2h2final6 567 590 IPR013087 -
Vivi576g00006 1252 SMART c2h2final6 635 658 IPR013087 -
Vivi576g00006 1252 Pfam SET domain 1108 1226 IPR001214 GO:0005515
Vivi576g00006 1252 ProSitePatterns Zinc finger C2H2 type domain signature. 569 590 IPR013087 -
Vivi576g00006 1252 ProSiteProfiles Zinc finger C2H2 type domain profile. 601 624 IPR013087 -
Vivi576g00006 1252 SMART preset_2 954 1081 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi576g00006 1252 Gene3D SET domain 935 1233 IPR046341 -
Vivi576g00006 1252 SMART set_7 1097 1235 IPR001214 GO:0005515
Vivi576g00006 1252 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 3 1252 - -
Vivi576g00006 1252 ProSitePatterns Zinc finger C2H2 type domain signature. 706 727 IPR013087 -
Vivi576g00006 1252 ProSiteProfiles SET domain profile. 1097 1229 IPR001214 GO:0005515
Vivi576g00006 1252 SUPERFAMILY SET domain 948 1242 IPR046341 -
Vivi576g00006 1252 ProSitePatterns Zinc finger C2H2 type domain signature. 637 659 IPR013087 -
Vivi576g00006 1252 Gene3D Classic Zinc Finger 561 633 - -
Vivi576g00006 1252 MobiDBLite consensus disorder prediction 667 695 - -
Vivi576g00006 1252 ProSiteProfiles Zinc finger C2H2 type domain profile. 635 664 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi576g00006 5 1251 C2H2 Transcription Factor Family AT2G23740 49.525 0.0 1180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi576g00006 Pre-SET 4.1e-14 No_clan