Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi576g00001 ATGCCTACAGACGAGAATTTTGCTGCTAGAGGTTTCTGTGGCCCTTCAATATGCTCGCTTTGCAGTACTGCTTTAGATTCTACTAAACATATTTCCTTTGAGTGCAACTTTGTCATTCCAATTTGGAACTGGCTGCTGGATAAATTGCAATTTGCAGGCACCATAAACAAGATAATGGATTGCTTTGAGCTTATGTTGGTTCCTAGATCCCCACAGGATATGGCAATTGTCCTCTCCATTGTTTACAGCTTCTTCTACCAAGTTTGGAGAGCCAGAAATTCGAACAGATTTGATGGCAAAATAATACATTGGAAGTCTTGTATCACTCATATTATGGCTCGAGCCAAGTGGGTAGGTGACAATACGAGAAACACTTCGAACAACTCTATCTCAAGCTTTTCAATTTTGAAAGGGATGCATATTAACATAAATCCTAGAAGACTCTCTTCATTCTTGGAGATTCTTTGGTGTCTTTCCCCAATAGGATGGGTTAAAGCTAATATTGACGGTGTTGCTCGAGGTGATCCGGTCCTTATGGCTTGTGGTGGAATTTTCCGTGATAATAACGCTACTCATTTGGGAAGTTTTTGTGACTATACGGGAGAAGGGAACTCTGAATTGGTTGAGCTTTGGACAGCTATGCTTGCTGTTCAAAAAGCAGTTAACATGGGATGGAGGAAGCTTTGGATCGAAACGGACTGTATGCTTGTGGTGAAAGCTTTCTCTGATCCGGCTCTTGTTCCTTGGAGAATCAGATCTCGTTGGCTCAGTTGTCATGCTTACTCTCAAAGGATGGAATTCATGGTCTCGCATATTTATAGGGAAGCCAATTTTTGTGCTGATTATCTATCGAATATTGGACATACTTGCGGATTTTTTGTTGGTAAGGTTCTCTACTACATTTTTCTCACAATCCCATCTGATCAATACATGCAAACAAAGCTATCTAACATGGAAAAATTAATGAAACCCCTTGTAGTAATTCTTTTTTTGTTTTTGAGTGTGCACGATGTGTCTTTGGCAAGAACAAAGAAGAGTGAGAATAAGATGAATTACATTGTTCATGTTTCCAAATCCACAATTCCAACAAGCTTCAACCACCCTTCAATCTGGTACAAATCAATTCTGAAGTCGGTATCCCAGTCAGCAGAAGTACTATATAGCTATGATAAGGCAATAAATGGATTCTCGACAAGTTTGAGTGATGAAGAACTTGAGTTACTAAAAAGGCAATATGGGATTCTAAAGGTGACACCAGATAAAAAGTACAAACTTCACACAACCCGAACACCGAAGTTTCTTGGGCTTGATAAAATTGCTAATTTGTTCCCCACGACAAACAAAAGTAATGATGTAATTGTGGGAGTAATAGACTCAGGTGTATGGCCTGAAAGCAAAAGTTTTGATGATACTGGATTCGGGCCTATCCCGCACAAATGGAAAGGAAAATGTGAAACAGGTACCAATTTTACAACATCTAACTGTAATAAGAAATTGATTGGTGCTAGGTTTTTTGCAAAGGGTTTCGAGGCAAGTTGGGGTCCAATTAATGAAACCATTTTGTATAGATCACCTCGAGATGATCTAGGCCATGGAACTCACACTGCGAGCACAGCTATAGGATCTACGGTGGAAAACACAAGTTTTTTTGGCTATGCCAAAGGGACTGCAAGTGGGATGGCAATTGGTGCTAGAGTTGCTGTCTATAAGGTTTGTTGGAAAACTTCCTGCATGGATTCTGATATATTGGCAGGAATAGATCAAGCCATTGCTGACAACGTCAATATTCTTTCTTTGTCGCTTGGAGGTTCAAAAAATGATTACTTTAAGGATGGCATCACAATTGGAGCCTTTGCAGCAATGGAACATGGCATTCTAGTCTCATGTTCAGCAGGAAATTCTGGCCCTACTCCTTTCAAGGTAGATAATGTAGCACCATGGATTACCACTGTGGGAGCTGGAACACTCGATCGAGATTTCCCTGCATACGTCAGTTTGGGAAATGGAAAAAATTATTCAGGTGTGACCCTTTATAAAGGTAACGGTTTGCCCGATACTCTTGTGCCAATCATATATGCAGGGAACGCAAGCAAGGGTGAAGTAAGAAGTGCTGAGTTATGTTACTCACATAGCTTGGCTCCGGAAAAAGTAGCAGGAAAGATTGTGTTGTGTGATCGTGGAGATCTCGCTCCGATATTCCAAGGAGATACTGTAAAATCTGCGGGTGGTTTGGGCATGGTGTTAGCCAACAGTAAGAGAGATGGAGAATCACCACTAGCATATGCCCATATTTTTCCAGCAACTTCAGTTAGCTTCACATATGGCAAAGCTATAAAAAATTACTTGTTTTCTGATCAAAACTCGACAGCTACAATTGTGTTTCGGGGAACAAAGCTAAAGGTTAAGCCATCTCCTATGGTTGCAGATTTCAGCTCACGAGGCCCCAATTCGATAACCCCTCAGATATTGAAACCTGATATTATTGCTCCTGGTGTTAACATTATAGCAGCTTATTCAAAAAGTGTGAGTCCTACATTTTGGGCTTTCGATCCTAGGCGTGTAGATTTCAATATTTTATCAGGCACATCCATGGCATGTCCACACGTAAGTGGACTAGCAGCTCTAATTAAGTCCATTCATCCAGATTGGAGCCCAGCCGTCATTCGATCCGCGTTGATGACAACCGCTTATACAACTTACAAAAACAATCAAACATTATTAGACAGTGCAACAAACAAGCCTTCAACTCCATTTGAGTTTGGTGCTGGACATGTTAACCCTATTTCCGCCCTAAATCCCGGACTCGTCTACGATTTAACAACAGATGACTACTTGAGCTTCCTCTGTGCATTGAACTACTCATCTGTTAATATTGAAATTGTAGCAAGGAGAAAGTACACATGCGATCTGAAGAAACAATACAGTGTAACAAACCTTAATTACCCTTCCTTTGTTGTGGTGTTTAAGAGTGAGCATGATAAGATTAAGCACACTCGGACTCTTACTAATGTGGGTGCAGCAAGAACTTACAAGGTATCAGTTAAGTCAAATGTTGCATCTATCAAGATCTTAGTTGAACCAAAAGTGTTAAGTTTTAAGAAAAATGAGAAAAAATCATACGTAGTTACATTTACTACATCAACTTTGAAACAAAATATTACTCATAGTTTTGGAAGCTTGGAATGGTTTGATGGAAAAACTCTTGTTAGAAGTCCTATAGCGTTTAGTTGGAAATTACATTGA 3243 0.3996 MPTDENFAARGFCGPSICSLCSTALDSTKHISFECNFVIPIWNWLLDKLQFAGTINKIMDCFELMLVPRSPQDMAIVLSIVYSFFYQVWRARNSNRFDGKIIHWKSCITHIMARAKWVGDNTRNTSNNSISSFSILKGMHININPRRLSSFLEILWCLSPIGWVKANIDGVARGDPVLMACGGIFRDNNATHLGSFCDYTGEGNSELVELWTAMLAVQKAVNMGWRKLWIETDCMLVVKAFSDPALVPWRIRSRWLSCHAYSQRMEFMVSHIYREANFCADYLSNIGHTCGFFVGKVLYYIFLTIPSDQYMQTKLSNMEKLMKPLVVILFLFLSVHDVSLARTKKSENKMNYIVHVSKSTIPTSFNHPSIWYKSILKSVSQSAEVLYSYDKAINGFSTSLSDEELELLKRQYGILKVTPDKKYKLHTTRTPKFLGLDKIANLFPTTNKSNDVIVGVIDSGVWPESKSFDDTGFGPIPHKWKGKCETGTNFTTSNCNKKLIGARFFAKGFEASWGPINETILYRSPRDDLGHGTHTASTAIGSTVENTSFFGYAKGTASGMAIGARVAVYKVCWKTSCMDSDILAGIDQAIADNVNILSLSLGGSKNDYFKDGITIGAFAAMEHGILVSCSAGNSGPTPFKVDNVAPWITTVGAGTLDRDFPAYVSLGNGKNYSGVTLYKGNGLPDTLVPIIYAGNASKGEVRSAELCYSHSLAPEKVAGKIVLCDRGDLAPIFQGDTVKSAGGLGMVLANSKRDGESPLAYAHIFPATSVSFTYGKAIKNYLFSDQNSTATIVFRGTKLKVKPSPMVADFSSRGPNSITPQILKPDIIAPGVNIIAAYSKSVSPTFWAFDPRRVDFNILSGTSMACPHVSGLAALIKSIHPDWSPAVIRSALMTTAYTTYKNNQTLLDSATNKPSTPFEFGAGHVNPISALNPGLVYDLTTDDYLSFLCALNYSSVNIEIVARRKYTCDLKKQYSVTNLNYPSFVVVFKSEHDKIKHTRTLTNVGAARTYKVSVKSNVASIKILVEPKVLSFKKNEKKSYVVTFTTSTLKQNITHSFGSLEWFDGKTLVRSPIAFSWKLH 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi576g00001 1080 CDD Peptidases_S8_3 423 897 IPR034197 -
Vivi576g00001 1080 Gene3D - 657 800 - -
Vivi576g00001 1080 Pfam PA domain 704 778 IPR003137 -
Vivi576g00001 1080 SUPERFAMILY Ribonuclease H-like 162 288 IPR012337 -
Vivi576g00001 1080 Gene3D Peptidase S8/S53 domain 451 944 IPR036852 GO:0004252|GO:0006508
Vivi576g00001 1080 Pfam Peptidase inhibitor I9 352 426 IPR010259 -
Vivi576g00001 1080 Gene3D - 162 288 IPR036397 GO:0003676
Vivi576g00001 1080 FunFam subtilisin-like protease SBT1.5 657 799 - -
Vivi576g00001 1080 FunFam Subtilisin-like protease SBT1.9 341 426 - -
Vivi576g00001 1080 SUPERFAMILY Subtilisin-like 425 935 IPR036852 GO:0004252|GO:0006508
Vivi576g00001 1080 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 335 426 IPR037045 -
Vivi576g00001 1080 PRINTS Subtilisin serine protease family (S8) signature 860 876 IPR015500 -
Vivi576g00001 1080 PRINTS Subtilisin serine protease family (S8) signature 527 540 IPR015500 -
Vivi576g00001 1080 PRINTS Subtilisin serine protease family (S8) signature 449 468 IPR015500 -
Vivi576g00001 1080 CDD PA_subtilisin_like 663 792 - -
Vivi576g00001 1080 CDD RNase_H_like 167 285 IPR044730 -
Vivi576g00001 1080 Gene3D - 948 1077 - -
Vivi576g00001 1080 Pfam Subtilase family 450 923 IPR000209 GO:0006508|GO:0008236
Vivi576g00001 1080 Pfam Reverse transcriptase-like 167 285 IPR002156 GO:0003676|GO:0004523
Vivi576g00001 1080 ProSitePatterns Serine proteases, subtilase family, serine active site. 861 871 IPR023828 -
Vivi576g00001 1080 ProSiteProfiles Serine proteases, subtilase domain profile. 433 931 - -
Vivi576g00001 1080 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 352 1074 IPR045051 -
Vivi576g00001 1080 FunFam Subtilisin-like protease SBT1.5 451 676 - -
Vivi576g00001 1080 Pfam Fibronectin type-III domain 978 1074 IPR041469 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi576g00001 343 1077 Subtilisin-like Serine Gene Family AT5G67360 62.415 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi576g00001 - - vvo:131633560 2182.53