Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi572g00006 ATGGGAACTAGTTTTCTACTCATCTACAACAAAATCAAGATTCTCCTTTGGTTTATTGCATGGACATCCTTAAACTCATGCAATTCACAACAACCCTACGACATATCCAATTGTTATTCAAGTCAAACCTCACCAGGTTCAAGGTACACATGCAATTCAACACATGACACATGCAAAACATTCTTAGTATACAGATCAAACCACAATTTCCAAACCATTTCACAAATCTCAAACCTCTTCAACAAAACAACCAATGAGGTTCTTCACATAAACAACCTCACATCATCTTCTCAAATCCTCAAACAAGGTAAAGAAGTTCTTATTCCTATTGAATGTACATGTTCTGGCCAACTTTACCAAGCCAAACTCACCTACAAAGTTCTTGACAACACACAAACATTTTCAAGTATTGCTTGTGAGGTTTTTGAAGGACTATTGAAATATTTCACACTTTCTAATGAAAACCAATCACAAGGTAATAATGAGCCTAAAGTTGGTGATGAACTTTATGTCCCTCTTAGATGTGCATGTTCACAAAATTTCTCTAAAAGTGTAATAAAGTACTTTGTTACATACCCTCTTATAGAAGGAGATACTTTTGATAAATTGATGAAGAAATTTGGTTTCTCTCTTGAAGATTTCTTTGAAGCAAATCAATTGCAAACCTATTCATCTATTTTTCCTATGACAGTTGTTTTGATTCCATTACAAAATGAAAATGGTTCAATCAAAATTCTTGATGTTCCAGATTCTCCTTCTCCACCTCCTGATTTTCTTCCAATAAATCCATTTGAGACACAAGGATCATCAACACAAGCATCAAATTTGTATATTGCAGGACCTATTATAGGTTTTTTCTTGTTCATAACATTGGTTGCAAGTGGATTCTACATGAAGAAACTAAAACAAACTGATGTTGCTATTGTTGACTCTTTCAATCCAACAAACTCAACCACTTTATGGTCACCAATAAGAACCTCTACAACTTCATGTTTATCTCCTGATTTTCTTGTTGGATTAAAGTATTGTTTGCTTAATTACCACATAGAAGAGATAGAAAAAGCTACAAAGTTTTTTAGTGATGTGAACAAGATTGGTGAGGTTGTTTATAAGGGACTAATCAATGATATTGAGGTGATGATAAAGAGGTTGAGATTTGAAGAAACTAGTGAGGTAATTGATTTACATTCAAGAATCAATCATGTTAACATTGTGAATTTGATTGGTGTTTGTTATGGTGAGGGTGATTTGGTTTCATGGTCTTATTTAGTTTTTGAGTTACCAAAAAATGGTTGCTTAAGGGATTGTTTATTGGATCCATGCAACACATTGGATTGGTATAGAAGAACACAAATAGTATTTGACATAGCAACATGTCTATACTATTTGCATTATTGTTCTTTTCCTTCTTATGCTCATATGAATGTGAATAGTAGGAATATATTTGTGACTGAAAATTGGAGAGGAAAATTGGCAGATGTTGGAGGTGTGTCCAACAATGTTTTGCATGGAAGTGTTTCACAAAAGGTTGATATTTTTGCATTTGGTGTTGTGTTGCTTGAGTTGATATCAGGGAGAGAGAAGTGTGAGGGGAAATTGATTAAAGATTGTGTTGGATTTTTGATGGGGGAAGGGAGTGAAGGTGGAGGTTGTTTTGAAGGGTTGAGGAGTTTTGTGGATCCTAATTTGAAGGATTATTCTCTTCCGGAGGCTCTTTGTTTGTGTTTTTTAGCTAAGGATTGTTTGAAAGATGATCCTATGCTTAGGCCAACTATGGATGATATCATGAAGGTTCTTGCAAAAATGGTTTAG 1812 0.3427 MGTSFLLIYNKIKILLWFIAWTSLNSCNSQQPYDISNCYSSQTSPGSRYTCNSTHDTCKTFLVYRSNHNFQTISQISNLFNKTTNEVLHINNLTSSSQILKQGKEVLIPIECTCSGQLYQAKLTYKVLDNTQTFSSIACEVFEGLLKYFTLSNENQSQGNNEPKVGDELYVPLRCACSQNFSKSVIKYFVTYPLIEGDTFDKLMKKFGFSLEDFFEANQLQTYSSIFPMTVVLIPLQNENGSIKILDVPDSPSPPPDFLPINPFETQGSSTQASNLYIAGPIIGFFLFITLVASGFYMKKLKQTDVAIVDSFNPTNSTTLWSPIRTSTTSCLSPDFLVGLKYCLLNYHIEEIEKATKFFSDVNKIGEVVYKGLINDIEVMIKRLRFEETSEVIDLHSRINHVNIVNLIGVCYGEGDLVSWSYLVFELPKNGCLRDCLLDPCNTLDWYRRTQIVFDIATCLYYLHYCSFPSYAHMNVNSRNIFVTENWRGKLADVGGVSNNVLHGSVSQKVDIFAFGVVLLELISGREKCEGKLIKDCVGFLMGEGSEGGGCFEGLRSFVDPNLKDYSLPEALCLCFLAKDCLKDDPMLRPTMDDIMKVLAKMV 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi572g00006 603 SUPERFAMILY Protein kinase-like (PK-like) 342 599 IPR011009 -
Vivi572g00006 603 Pfam Protein tyrosine and serine/threonine kinase 376 495 IPR001245 GO:0004672|GO:0006468
Vivi572g00006 603 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 17 602 - -
Vivi572g00006 603 Pfam LysM domain 196 235 IPR018392 -
Vivi572g00006 603 Gene3D Transferase(Phosphotransferase) domain 1 499 602 - -
Vivi572g00006 603 Gene3D LysM domain 176 244 IPR036779 -
Vivi572g00006 603 Gene3D Phosphorylase Kinase; domain 1 339 426 - -
Vivi572g00006 603 ProSiteProfiles Protein kinase domain profile. 286 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi572g00006 603 ProSiteProfiles LysM domain profile. 190 234 IPR018392 -
Vivi572g00006 603 Gene3D Transferase(Phosphotransferase) domain 1 429 498 - -
Vivi572g00006 603 CDD LysM 196 234 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi572g00006 15 603 Receptor kinase-like Gene Family AT2G23770 30.079 1.23e-66 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vivi572g00006 PK_Tyr_Ser-Thr 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi572g00006 - - lja:Lj1g3v4047410.1 764.222