Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi569g00018 ATGGCTCTCTTCAAGATTCATGATTCACCATCCTCACCTTCATCCTATCTCTCTTCTTCCATTACTACTAATGCTGATGATCTTGGTTCTCTTTCTTGTAAACGGAAATGTCGACAACAAGAAACCAGCAACATTTCATCATTGTTGGATTTGTCTTCATATCCTAATGAAACCAATGTTTGTCTCCACCTATCTCTTTCTTTTTGTAATTGCATTCAAATTGCCAAGAAACAAAAACTTGCTCACCAAGAAACGAATGCTAATGCTGTTGGAACAAGTTCTGATTCTTCAACCAATGGCGATGATCCATGGAAAATCAGGAAGGTGCTCACAGCAAGTGATCTTGGCAACAATAGCAGACTTCTGTTGAAGAAAGAATTGGCTAAAAAATGGGTGGTTCCTTTTTTGGATAAAGATCCAGCTGAAAAAGATGGAGTGAAAGTTTCGGTGTTTGATGTTGACACTCAAGATCTCCGTTCTCTTGTTTTCAAGGTATGGCCTTCCAATGGAAGTCATGTTTTCAACGATACGTGGATCACTGATTTTGTAGATAAACGGAACTTAAAGGCTGGAGATGAAATTGGTCTTAAATGGGATAAAGAAGAGAAGAAATTTGATTTTTCTGTTCTTCGTAGGGGTTCATCACAGCAGATATAG 657 0.382 MALFKIHDSPSSPSSYLSSSITTNADDLGSLSCKRKCRQQETSNISSLLDLSSYPNETNVCLHLSLSFCNCIQIAKKQKLAHQETNANAVGTSSDSSTNGDDPWKIRKVLTASDLGNNSRLLLKKELAKKWVVPFLDKDPAEKDGVKVSVFDVDTQDLRSLVFKVWPSNGSHVFNDTWITDFVDKRNLKAGDEIGLKWDKEEKKFDFSVLRRGSSQQI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi569g00018 218 CDD B3_DNA 104 211 IPR003340 GO:0003677
Vivi569g00018 218 SUPERFAMILY DNA-binding pseudobarrel domain 101 213 IPR015300 -
Vivi569g00018 218 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 66 216 - -
Vivi569g00018 218 Gene3D - 101 216 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi569g00018 106 192 B3 DNA Binding Superfamily AT1G20600 34.091 2.79e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi569g00018 - - psat:127081321 216.083