Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi568g00002 ATGTGTAGTAGTATCTTTGTGTCATCAACAACAAGTATGGACAATTACCAAGGTGATTTAACTGACATAATCAGAGCTACTGGTACTGGAGCTGGAGCATATAGTACAATCACTTCATCATCATCTTCTGAACCTCCCTTACAACATCATCATGATGATAATCAGTGGCATCCTCATCATCAACATCATCAGCATCATCAACCTATGAGTTTCTCTAATTCTATTCTTGAAGATAACAGATCAGGATCAACAAACAACATCAACATGAACATGAACATGAACATCTTTGGTGATCCATTATTCTCAACTCTAAGAGATCCATTTCTACAAGAGCTTGATCATATACCTTCTTCTTCCTACTTCAACATCCCAACTAGTAGTATAATTGATGTTGCTGCAGCTTCTGGTGTTAGCGTTACTACTTCTTCATCTTCTTCTCTTTCTGCTTCTGCTTCTGTTTTTGCACTTGATCAAGATCATCATCATAATCATAATCATCATGAGATGATGAGATCAGGTTCAAGGCCATGTAAGAACATATTCTCAAACATGATTCAGATCTCTCCTAATGCAACAAAGCTATCAAATTATGAATCTTCTTCTTCCACCATGGCACCTTCTCCAAGGCAAATTAAACCAGTTGTTGCTGTTTCAACCAACATCAATATTAATGCTAAGGATTCTCTTCTAGACAACACAGGATCAGGAACAGTTCAGATCTCATCTTCAAGGAATAATACAGGCCTTAAACGAAGAAAGAATCAGGCAAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAACAGTAGACAAACTGGTGAAGTTGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCAAGGGGTTATTACAGATGCAGCAGTTCGAAGGGTTGTTCGGCAAGGAAACAAGTTGAGAGAAGCAGAACAGATCCAAACATGTTAGTTATAACCTACACTTCAGAACACAATCATCCATGGCCAACACAAAGAAATGCTTTAGCAGGTTCAACAAGATCTCAACCCTCCAAAAACAGCACTTCCATGAAAAACTCAGAAACTTCATCTCAACCACAAACTGACACAACAACAACAACAAAGACAAAAGAAGAACAACATCAAGAGAGTGATGGAAATGGAAATGATTCACCAGTTGTTAACAGTGTGAAGGAAGAGAGTATGGAAGATATAGAGAAGTTGCAAATTGAGATGGATGAAGGAGTAGAATTCAATGATGCACTTTCTTATAAGCCTTGTTTGATGGAAAATAATCAAAGTCATGAGGATTTTTTTGCTGAGTTAGGTGAAATTGAAGCTGATCCATTAGACCTATTGTTTAATCAAGGTTTTGGTGGTAATTCAAGTAATGATATTATTCATCAAAGAGATCATCAATCCAAGAGTTTAGATGCATTTCATCTCTTTGACTGGTCAGGTGACAACAACAACAACAATACCAACAACAACTCATTTGAAGAACCAAATAAAAGAAGGTTATTATGA 1536 0.3717 MCSSIFVSSTTSMDNYQGDLTDIIRATGTGAGAYSTITSSSSSEPPLQHHHDDNQWHPHHQHHQHHQPMSFSNSILEDNRSGSTNNINMNMNMNIFGDPLFSTLRDPFLQELDHIPSSSYFNIPTSSIIDVAAASGVSVTTSSSSSLSASASVFALDQDHHHNHNHHEMMRSGSRPCKNIFSNMIQISPNATKLSNYESSSSTMAPSPRQIKPVVAVSTNININAKDSLLDNTGSGTVQISSSRNNTGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNSTSMKNSETSSQPQTDTTTTTKTKEEQHQESDGNGNDSPVVNSVKEESMEDIEKLQIEMDEGVEFNDALSYKPCLMENNQSHEDFFAELGEIEADPLDLLFNQGFGGNSSNDIIHQRDHQSKSLDAFHLFDWSGDNNNNNTNNNSFEEPNKRRLL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi568g00002 511 FunFam probable WRKY transcription factor 14 252 332 - -
Vivi568g00002 511 MobiDBLite consensus disorder prediction 490 505 - -
Vivi568g00002 511 SUPERFAMILY WRKY DNA-binding domain 276 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi568g00002 511 MobiDBLite consensus disorder prediction 67 84 - -
Vivi568g00002 511 MobiDBLite consensus disorder prediction 322 376 - -
Vivi568g00002 511 MobiDBLite consensus disorder prediction 34 84 - -
Vivi568g00002 511 MobiDBLite consensus disorder prediction 234 249 - -
Vivi568g00002 511 Gene3D WRKY domain 252 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi568g00002 511 MobiDBLite consensus disorder prediction 295 406 - -
Vivi568g00002 511 ProSiteProfiles WRKY domain profile. 273 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi568g00002 511 MobiDBLite consensus disorder prediction 234 254 - -
Vivi568g00002 511 MobiDBLite consensus disorder prediction 490 511 - -
Vivi568g00002 511 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 19 457 IPR044810 GO:0003700
Vivi568g00002 511 Pfam WRKY DNA -binding domain 280 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi568g00002 511 SMART WRKY_cls 278 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi568g00002 1 499 WRKY Transcription Factor Family AT1G30650 40.583 5.62e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi568g00002 WRKY 3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi568g00002 - - gmx:100805707 499.975